Plugin name: CyGoose
Description: The CyGoose Cytoscape Plugin gives any network in Cytoscape full access to the Gaggle. The Gaggle is a tool to create a data exploration and analysis environment. Other geese (independent threads/tools which Cytoscape can now interact with through the Gaggle Boss) can be found at http://gaggle.systemsbiology.org/docs/geese/.New Features:
- Select a default layout (excluding yFiles layouts) to apply to subsequent incoming network broadcasts
- A Gaggle species can now be set in the text box on the left, and will update based on the species of an incoming broadcasts. Note the species of each Goose (network) is not remembered in this box as every incoming broadcast can change it. A user may type in their own species name as well.
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Version: 2.5
Release Date: 2007-07-25
Authors: Sarah Killcoyne Institute for Systems Biology
John Lin, Kevin Drew and Richard Bonneau ,NYU Bonneau Lab
Verified to work in: 2.4,2.5
Download Jar/zip: click here (1.11MB)
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Version: 2.6
Release Date: 2007-10-29
Authors: Sarah Killcoyne and Dan Tenenbaum ,Institute for Systems Biology
John Lin, Kevin Drew and Richard Bonneau ,NYU Bonneau Lab
Release notes: click here
Verified to work in: 2.5
Download Jar/zip: click here (1.06MB)
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Version: 2.7
Release Date: 2009-03-19
Authors: Sarah Killcoyne and Dan Tenenbaum ,Institute for Systems Biology
John Lin, Kevin Drew and Richard Bonneau ,NYU Bonneau Lab
Release notes: click here
Verified to work in: 2.6.1
Download Jar/zip: click here (135.9KB)
Download source: http://chianti.ucsd.edu/svn/csplugins/trunk/isb/skillcoyne/CyGoose/tags/CyGoose_2.7/
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Version: 2.8
Release Date: 2010-03-23
Authors: Sarah Killcoyne and Dan Tenenbaum ,Institute for Systems Biology
John Lin, Kevin Drew and Richard Bonneau ,NYU Bonneau Lab
Verified to work in: 2.6.1,2.6.3
Download Jar/zip: click here (136.1KB)
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Version: 2.9
Release Date: 2011-01-19
Authors: Sarah Killcoyne, Dan Tenenbaum and Wei-ju Wu ,Institute for Systems Biology
John Lin, Kevin Drew and Richard Bonneau ,NYU Bonneau Lab
Release notes: click here
Verified to work in: 2.8
Download Jar/zip: click here (100.7KB)
Download source: https://github.com/weiju/cygoose
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Version: 2.10
Reference: https://github.com/weiju/cygoose/issues/closed#issue/2
Release Date: 2011-01-26
Authors: Sarah Killcoyne, Dan Tenenbaum and Wei-ju Wu ,Institute for Systems Biology
John Lin, Kevin Drew and Richard Bonneau ,NYU Bonneau Lab
Release notes: click here
Verified to work in: 2.8
Download Jar/zip: click here (100.6KB)