Constant Field Values


Contents
nct.graph.*

nct.graph.SequenceGraph<NodeType extends java.lang.Comparable<? super NodeType>,WeightType extends java.lang.Comparable<? super WeightType>>
public static final int BLAST 2
public static final int DUMMY 0
public static final int FASTA 1

nct.service.*

nct.service.homology.blast.BiojavaLocalBlast
public static final java.lang.String E_VALUE "E_VALUE"
public static final java.lang.String OUTPUT_FILE "OUTPUT_FILE"
public static final java.lang.String QUERY_SENTINEL "QUERY_SEQS"
public static final java.lang.String TARGET_DB_SENTINEL "TARGET_DB"

nct.service.homology.blast.LocalBlast
public static final java.lang.String E_VALUE "E_VALUE"
public static final java.lang.String OUTPUT_FILE "OUTPUT_FILE"
public static final java.lang.String QUERY_SENTINEL "QUERY_SEQS"
public static final java.lang.String TARGET_DB_SENTINEL "TARGET_DB"

nct.visualization.*

nct.visualization.cytoscape.dual.SpringEmbeddedLayouter
public static final double DEFAULT_ANTICOLLISION_SPRING_STRENGTH 100.0
public static final double DEFAULT_AVERAGE_ITERATIONS_PER_NODE 20.0
public static final double DEFAULT_DISCONNECTED_NODE_DISTANCE_SPRING_REST_LENGTH 2500.0
public static final double DEFAULT_DISCONNECTED_NODE_DISTANCE_SPRING_STRENGTH 0.0
public static final double DEFAULT_NODE_DISTANCE_REST_LENGTH_CONSTANT 200.0
public static final double DEFAULT_NODE_DISTANCE_STRENGTH_CONSTANT 15.0
public static final int DEFAULT_NUM_LAYOUT_PASSES 2