AdditiveCompatibilityCalculator
BasicDistanceGraph
BasicEdge
BasicGraph
BasicKPartiteGraph
BasicWeightedNode
BiojavaLocalBlast
BlastGraph
BlastXMLFileFilterInputStream
ColorCodingPathSearch
CompatibilityCalculator
CompatibilityGraph
DegreePreservingRandomizer
DIPInteractionNetwork
DIPSequenceDatabase
DIPSynonyms
DistanceGraph
DualLayout
DualLayoutTask
DuplicateThresholdFilter
Edge
EdgeWeightShuffle
FastaGraph
FastaProteinParser
Filter
Graph
GraphRandomizer
GreedyComplexSearch
HomologyGraph
HomologyModel
InteractionGraph
InteractionNetwork
KPartiteGraph
LocalBlast
LogLikelihoodScoreModel
NetworkBlast
NewComplexSearch
NodePairSet
ScoreModel
SearchGraph
SequenceDatabase
SequenceGraph
SIFHomologyReader
SIFInteractionNetwork
SIFParser
SimpleEdgeScoreModel
SimpleScoreModel
SortFilter
SpringEmbeddedLayouter
SynonymMapper
TestSearch
ThresholdRandomizer
UniqueCompatNodeFilter
WeightedNode
XMLSaxEventDistributor
ZIPSIFWriter
|