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Packages that use SynonymMapper | |
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nct.service.homology.blast | |
nct.service.sequences | |
nct.service.synonyms |
Uses of SynonymMapper in nct.service.homology.blast |
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Fields in nct.service.homology.blast declared as SynonymMapper | |
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protected SynonymMapper |
LocalBlast.synonyms
Used for mapping various ids to types of synonyms |
protected SynonymMapper |
BiojavaLocalBlast.synonyms
Used for mapping various ids to types of synonyms |
Constructors in nct.service.homology.blast with parameters of type SynonymMapper | |
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BiojavaLocalBlast(java.util.Properties props,
SynonymMapper synonyms,
java.lang.String tmpOutFile,
double eValue)
Constructor. |
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LocalBlast(java.util.Properties props,
SynonymMapper synonyms,
java.lang.String tmpOutFile,
double eValue)
Constructor. |
Uses of SynonymMapper in nct.service.sequences |
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Fields in nct.service.sequences declared as SynonymMapper | |
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protected SynonymMapper |
DIPSequenceDatabase.synonyms
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Constructors in nct.service.sequences with parameters of type SynonymMapper | |
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DIPSequenceDatabase(java.lang.String fastaFile,
SynonymMapper synonyms)
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Uses of SynonymMapper in nct.service.synonyms |
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Classes in nct.service.synonyms that implement SynonymMapper | |
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class |
DIPSynonyms
Implements a SynonymMapper based on a DIP XIN file. |
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