Package nct.networkblast.score

Interface Summary
ScoreModel<NodeType extends Comparable<? super NodeType>,WeightType extends Comparable<? super WeightType>> This interface will provide the scoring interface for all scoring algorithms to be used on a Graph object.
 

Class Summary
LogLikelihoodScoreModel<NodeType extends Comparable<? super NodeType>> This class implements the log likelihood edge scoring scheme described in the supplemental to Sharan, et al., 2005, Conserved patterns of protein interaction in multiple species, PNAS, 102(6).
SimpleEdgeScoreModel<NodeType extends Comparable<? super NodeType>> This class implements a simple score model that basically just returns the weight associated with a particular object
SimpleScoreModel<NodeType extends WeightedNode<?,java.lang.Double>> This class implements a simple score model that basically just returns the weight associated with a particular object