Package nct.service.homology.blast

Class Summary
BiojavaLocalBlast A Blast implementation of the HomologyModel interface that runs Blast locally.
BlastXMLFileFilterInputStream This class extends a FilterInputStream and is used to filter out the extra xml version and DOCTYPE tags that come in Blast "XML" files for multiple queries and wraps the entire document in blast_aggregate tags.
LocalBlast A Blast implementation of the HomologyModel interface that runs Blast locally.