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H

halt() - Method in class nct.visualization.cytoscape.Monitor
 
handlers - Variable in class nct.xml.XMLSaxEventDistributor
 
hashCode() - Method in class nct.graph.BasicEdge
 
homModel - Variable in class nct.networkblast.HomologyGraph
 
HOMOLOGY_MULTIPLIER - Static variable in class nct.visualization.cytoscape.dual.SpringEmbeddedLayouter
 
homologyGraph - Variable in class nct.networkblast.CompatibilityGraph
 
HomologyGraph - Class in nct.networkblast
This class creates a K-partite graph based on the homology of proteins between two or more species.
HomologyGraph(HomologyModel, double) - Constructor for class nct.networkblast.HomologyGraph
 
HomologyGraph(HomologyModel, double, Collection<SequenceGraph<String, Double>>) - Constructor for class nct.networkblast.HomologyGraph
 
homologyMap - Variable in class nct.networkblast.CompatibilityGraph
 
HomologyModel - Interface in nct.service.homology
An interface that provides access to something that provides expectation values (e.g.Blast or Fasta).
homologyPairSet - Variable in class nct.visualization.cytoscape.dual.SpringEmbeddedLayouter
 

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