nct.visualization.cytoscape
Class CytoscapeConverter
java.lang.Object
nct.visualization.cytoscape.CytoscapeConverter
public class CytoscapeConverter
- extends java.lang.Object
A utility class for converting an NCT graph into a CyNetwork.
Method Summary |
static Graph<java.lang.String,java.lang.Double> |
convert(cytoscape.CyNetwork network,
Monitor monitor)
|
static cytoscape.CyNetwork |
convert(Graph<java.lang.String,java.lang.Double> nctGraph,
java.lang.String title,
Monitor monitor)
Converts an NCT graph into a CyNetwork. |
Methods inherited from class java.lang.Object |
clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait |
CytoscapeConverter
public CytoscapeConverter()
convert
public static Graph<java.lang.String,java.lang.Double> convert(cytoscape.CyNetwork network,
Monitor monitor)
convert
public static cytoscape.CyNetwork convert(Graph<java.lang.String,java.lang.Double> nctGraph,
java.lang.String title,
Monitor monitor)
- Converts an NCT graph into a CyNetwork.
- Parameters:
nctGraph
- The NCT graph to be converted.title
- The title of the new Cytoscape graphmonitor
- Monitor that will tell if convert() needs to
terminate prematurely. Monitor will not be informed of any progress.
Pass null if no monitoring is needed.
- Returns:
- A new CyNetwork based on the input graph.