cytoscape.layout
Class LayoutTask

java.lang.Object
  cytoscape.layout.LayoutTask

All Implemented Interfaces:

cytoscape.task.Haltable, cytoscape.task.Task, Runnable

public class LayoutTask
extends Object
implements cytoscape.task.Task

A wrapper for applying a layout in a task. Use it something like this:

TaskManager.executeTask( new LayoutTask(layout, view), LayoutTask.getDefaultTaskConfig() );

Constructor Summary

LayoutTask(CyLayoutAlgorithm layout, CyNetworkView view)
Creates the task.

Method Summary

static cytoscape.task.ui.JTaskConfig	getDefaultTaskConfig() This method returns a default TaskConfig object.
String	getTitle() Get the "nice" title of this algorithm
void	halt() Halt the algorithm if the CyLayoutAlgorithm supports it.
void	run() Run the algorithm.
void	setTaskMonitor(cytoscape.task.TaskMonitor monitor) Sets the task monitor to be used for the layout.

Methods inherited from class java.lang.Object

equals, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

LayoutTask

public LayoutTask(CyLayoutAlgorithm layout,
                  CyNetworkView view)

Creates the task.

Parameters:

layout - The CyLayoutAlgorithm to apply.

view - The view the algorithm should be applied to.

Method Detail

setTaskMonitor

public void setTaskMonitor(cytoscape.task.TaskMonitor monitor)

Sets the task monitor to be used for the layout.

Specified by:

setTaskMonitor in interface cytoscape.task.Task

run

public void run()

Run the algorithm.

Specified by:

run in interface cytoscape.task.Task

Specified by:

run in interface Runnable

halt

public void halt()

Halt the algorithm if the CyLayoutAlgorithm supports it.

Specified by:

halt in interface cytoscape.task.Haltable

Specified by:

halt in interface cytoscape.task.Task

getTitle

public String getTitle()

Get the "nice" title of this algorithm

Specified by:

getTitle in interface cytoscape.task.Task

Returns:

algorithm title

getDefaultTaskConfig

public static cytoscape.task.ui.JTaskConfig getDefaultTaskConfig()

This method returns a default TaskConfig object.

Returns:

a default JTaskConfig object.