Cytoscape 2.5.1 (c) 2006,2007 ISB, MSKCC, UCSD

cytoscape.view
Interface NetworkView


Deprecated. Will be removed April 2007. This interface defines methods for displaying a graph without specifying the details of the UI components surrounding the graph display.

public interface NetworkView


Method Summary
 void applyLayout(GraphView view)
          Deprecated. added for giny, applies the layout on the view
 GraphViewController getGraphViewController()
          Deprecated. DOCUMENT ME!
 JFrame getMainFrame()
          Deprecated. Return the frame in which the graph is displayed.
 CyNetwork getNetwork()
          Deprecated. Returns the network displayed by this object.
 GraphView getView()
          Deprecated.  
 VisualMappingManager getVizMapManager()
          Deprecated. Returns the visual mapper associated with this display.
 void redrawGraph(boolean doLayout, boolean applyAppearances)
          Deprecated. Redraws the graph.
 void setNewNetwork(CyNetwork newNetwork)
          Deprecated.  
 void setWindowTitle(String title)
          Deprecated.  
 

Method Detail

getNetwork

CyNetwork getNetwork()
Deprecated. 
Returns the network displayed by this object.


setNewNetwork

void setNewNetwork(CyNetwork newNetwork)
Deprecated. 

setWindowTitle

void setWindowTitle(String title)
Deprecated. 

getView

GraphView getView()
Deprecated. 
Returns:
A GINY GraphView

getMainFrame

JFrame getMainFrame()
Deprecated. 
Return the frame in which the graph is displayed. Useful for constructing dialogs dependent on this frame.


getVizMapManager

VisualMappingManager getVizMapManager()
Deprecated. 
Returns the visual mapper associated with this display.


redrawGraph

void redrawGraph(boolean doLayout,
                 boolean applyAppearances)
Deprecated. 
Redraws the graph. The arguments control what actions are performed before repainting the view.

Parameters:
doLayout - if true, applied the current layouter to the graph
applyAppearances - if true, the vizmapper will recalculate the node and edge appearances

applyLayout

void applyLayout(GraphView view)
Deprecated. 
added for giny, applies the layout on the view


getGraphViewController

GraphViewController getGraphViewController()
Deprecated. 
DOCUMENT ME!

Returns:
DOCUMENT ME!

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