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Class Summary |
| BiologicalProcessAnnotationReader |
The purpose of this class is to convert a 'gene_association.*' file (for
example 'gene_association.sgd') into a crufty old 'bioproc.anno' file that
Cytoscape's BioDataServer understands. |
| CellularComponentAnnotationReader |
The purpose of this class is to convert a 'gene_association.*' file (for
example 'gene_association.sgd') into a crufty old 'cellcomp.anno' file that
Cytoscape's BioDataServer understands. |
| MolecularFunctionAnnotationReader |
The purpose of this class is to convert a 'gene_association.*' file (for
example 'gene_association.sgd') into a crufty old 'molfunc.anno' file that
Cytoscape's BioDataServer understands. |
| OboOntologyReader |
The purpose of this class is to convert a 'gene_ontology.obo' file
to a crufty old 'go.onto' file that Cytoscape's BioDataServer understands. |
| OboOntologyReader2 |
The purpose of this class is to convert a 'gene_ontology.obo' file to a
crufty old 'go.onto' file that Cytoscape's BioDataServer understands. |
| SynonymReader |
The purpose of this class is to convert a 'gene_association.*' file
(for example 'gene_association.sgd') into a crufty old '*.syno' file that
Cytoscape's BioDataServer understands. |