cytoscape.data.writers
Class CytoscapeSessionWriter

java.lang.Object
  cytoscape.data.writers.CytoscapeSessionWriter

public class CytoscapeSessionWriter
extends Object

Write session states into files.
Basic functions of this class are:

• 1. Create network files
• 2. Create session state file
• 3. Get properties file locations
• 4. Zip them into one session file "*.cys"

Since:

2.3

Version:

1.0

Author:

kono

See Also:

XGMMLReader

Field Summary

static int	EDGE
static int	NODE

Constructor Summary

CytoscapeSessionWriter(String sessionName)
Constructor.

Method Summary

void	setSessionNote(String note) Set session note. Session note can be anything, it is just like a memo pad for the session.
void	writeSessionToDisk() Write current session to a local .cys file.

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Field Detail

NODE

public static final int NODE

See Also:

Constant Field Values

EDGE

public static final int EDGE

See Also:

Constant Field Values

Constructor Detail

CytoscapeSessionWriter

public CytoscapeSessionWriter(String sessionName)

Constructor.

Parameters:

sessionName - Filename of the session.

Method Detail

writeSessionToDisk

public void writeSessionToDisk()
                        throws Exception

Write current session to a local .cys file.

Throws:

Exception

setSessionNote

public void setSessionNote(String note)

Set session note.
Session note can be anything, it is just like a memo pad for the session. NOTE: session note should be set before calling writeSessionToDisk().

Parameters:

note - Session note string.