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Cytoscape 3.0.0-beta1 API | |||||||||
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| Packages that use CyGroup | |
|---|---|
| org.cytoscape.group | This package provides an API for creating and managing groups in Cytoscape. |
| org.cytoscape.group.data | An api for configuring CyGroups. |
| org.cytoscape.group.events | This package contains the various events and listeners related to group management, creation, and destruction. |
| Uses of CyGroup in org.cytoscape.group |
|---|
| Methods in org.cytoscape.group that return CyGroup | |
|---|---|
CyGroup |
CyGroupFactory.createGroup(CyNetwork network,
boolean register)
Creates a CyGroup object in the referenced network. |
CyGroup |
CyGroupFactory.createGroup(CyNetwork network,
CyNode node,
boolean register)
Creates a CyGroup object in the referenced network from an existing CyNode. |
CyGroup |
CyGroupFactory.createGroup(CyNetwork network,
CyNode node,
List<CyNode> nodes,
List<CyEdge> edges,
boolean register)
Creates a CyGroup object in the referenced network from an existing CyNode. |
CyGroup |
CyGroupFactory.createGroup(CyNetwork network,
List<CyNode> nodes,
List<CyEdge> edges,
boolean register)
Creates a CyGroup object in the referenced network initially populated with the supplied nodes. |
CyGroup |
CyGroupManager.getGroup(CyNode node,
CyNetwork network)
Return the group the corresponds to a particular node in a CyNetwork. |
| Methods in org.cytoscape.group that return types with arguments of type CyGroup | |
|---|---|
Set<CyGroup> |
CyGroupManager.getGroupSet(CyNetwork network)
Provides the set of all the groups known to the groups manager in a particular network. |
List<CyGroup> |
CyGroupManager.getGroupsForNode(CyNode node)
Return the list of CyGroups this node is in. |
List<CyGroup> |
CyGroupManager.getGroupsForNode(CyNode node,
CyNetwork network)
Return the list of CyGroups this node is in for
a particular network. |
| Methods in org.cytoscape.group with parameters of type CyGroup | |
|---|---|
void |
CyGroupManager.addGroup(CyGroup group)
Registers a group with the group manager. |
void |
CyGroupManager.destroyGroup(CyGroup group)
Destroy a group. |
| Method parameters in org.cytoscape.group with type arguments of type CyGroup | |
|---|---|
void |
CyGroupManager.addGroups(List<CyGroup> groups)
Registers a list of groups with the group manager. |
| Uses of CyGroup in org.cytoscape.group.data |
|---|
| Methods in org.cytoscape.group.data with parameters of type CyGroup | ||
|---|---|---|
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Aggregator.aggregate(CyTable table,
CyGroup group,
CyColumn column)
Aggregate the column for the members of the specified group into the group. |
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| Uses of CyGroup in org.cytoscape.group.events |
|---|
| Constructors in org.cytoscape.group.events with parameters of type CyGroup | |
|---|---|
GroupAboutToBeDestroyedEvent(CyGroupManager source,
CyGroup group)
Constructs event. |
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GroupAboutToBeRemovedEvent(CyGroup source,
CyNetwork network)
Constructs event. |
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GroupAboutToCollapseEvent(CyGroup source,
CyNetwork network,
boolean collapsing)
Constructs event. |
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GroupAddedEvent(CyGroupManager source,
CyGroup group)
Constructs event. |
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GroupAddedToNetworkEvent(CyGroup source,
CyNetwork network)
Constructs event. |
|
GroupCollapsedEvent(CyGroup source,
CyNetwork network,
boolean collapsed)
Constructs event. |
|
GroupEdgesAddedEvent(CyGroup source,
CyEdge edge)
Constructs event. |
|
GroupEdgesAddedEvent(CyGroup source,
List<CyEdge> edges)
Constructs event. |
|
GroupEdgesRemovedEvent(CyGroup source,
CyEdge edge)
Constructs event. |
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GroupEdgesRemovedEvent(CyGroup source,
List<CyEdge> edges)
Constructs event. |
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GroupNodesAddedEvent(CyGroup source,
CyNode node)
Constructs event. |
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GroupNodesAddedEvent(CyGroup source,
List<CyNode> nodes)
Constructs event. |
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GroupNodesRemovedEvent(CyGroup source,
CyNode node)
Constructs event. |
|
GroupNodesRemovedEvent(CyGroup source,
List<CyNode> nodes)
Constructs event. |
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Cytoscape 3.0.0-beta1 API | |||||||||
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