Package org.cytoscape.model

This package contains the core interfaces that define the basic network and table data types that constitute the foundation of Cytoscape.

See:
Description

Interface Summary

CyColumn	This class describes a column in a CyTable.
CyEdge	An object that represents an edge within a network of nodes (vertices) and edges.
CyIdentifiable	CyIdentifiable is an interface that indicates that the implementing object can be considered a key into a table.
CyNetwork	CyNetwork is the primary interface for representing a network (graph) data structure in Cytoscape.
CyNetworkFactory	A singleton factory object used for instantiating CyNetwork objects.
CyNetworkManager	Basic access to networks and view in an instance of Cytoscape.
CyNetworkTableManager	Provides access to all network-table relationships.
CyNode	An object that represents a node (vertex) within a network of nodes and edges.
CyRow	This interface represents one row in a CyTable.
CyTable	A simple representation of a table object consisting of rows and columns.
CyTableFactory	An interface describing a factory used for creating CyTable objects.
CyTableManager	A singleton object that provides access to the available tables in the system.
CyTableMetadata	A snapshot of information about a relationship shared between a CyTable instance and an associated CyNetworks.
VirtualColumnInfo	Information object for columns that stores extra Virtual Column information if applicable.

Class Summary

CyTableUtil	A collection of state-less, static utility methods provided to simplify querying of table objects.
SUIDFactory	This singleton class returns unique, positive SUID (session unique ID) values.

Enum Summary

CyEdge.Type	The Type enum is used by methods in CyNetwork to restrict the edges that match a query.
CyTable.Mutability	Mutability of the table specifies whether or not it is able to be deleted..
CyTable.SavePolicy	The SavePolicy of a table specifies whether or not it will be saved.
CyTableFactory.InitialTableSize	A description of the initial size of the table.

Package org.cytoscape.model Description

This package contains the core interfaces that define the basic network and table data types that constitute the foundation of Cytoscape.