|
Cytoscape 3.0.0-beta1 API | |||||||||
PREV NEXT | FRAMES NO FRAMES |
Packages that use Task | |
---|---|
org.cytoscape.io.read | Handle importing Cytoscape data (network, attributes, session, properties, etc) from files/URLs. |
org.cytoscape.io.write | This package provides factory interfaces to be used by anyone wishing to provide export or writing capabilities to the rest of Cytoscape. |
org.cytoscape.task | This package provides base classes for common task factory types as well as their associated task types found in Cytoscape. |
org.cytoscape.view.layout | This package provides access to the available layout algorithms, as well as provides abstract layout classes and layout information containers for the convenience of implementing other layout algorithms. |
org.cytoscape.work | This packages everything relating to tasks in Cytoscape. |
Uses of Task in org.cytoscape.io.read |
---|
Subinterfaces of Task in org.cytoscape.io.read | |
---|---|
interface |
CyNetworkReader
An extension of the Task interface that returns an array of CyNetwork objects that are read as part
of the Task. |
interface |
CyPropertyReader
An extension of the Task interface that returns a property object. |
interface |
CySessionReader
An extension of the Task interface that returns a org.cytoscape.property.session.Cysession object. |
interface |
CyTableReader
An extension of the Task interface that returns an array of CyTable objects. |
interface |
VizmapReader
An extension of the Task interface that returns a VisualStyle object. |
Uses of Task in org.cytoscape.io.write |
---|
Subinterfaces of Task in org.cytoscape.io.write | |
---|---|
interface |
CyWriter
A marker interface used to identify tasks involved in writing data. |
Uses of Task in org.cytoscape.task |
---|
Classes in org.cytoscape.task that implement Task | |
---|---|
class |
AbstractEdgeViewTask
The base class for all tasks that need to operate on an edge view and possibly its associated network view. |
class |
AbstractNetworkCollectionTask
The base class for all tasks that need to operate on a Collection of CyNetwork s. |
class |
AbstractNetworkTask
Base class for all tasks that need to operate on a CyNetwork . |
class |
AbstractNetworkViewCollectionTask
The base class for all tasks that need to operate on a Collection of CyNetworkView s. |
class |
AbstractNetworkViewTask
The base class for all tasks that need to operate on a network view. |
class |
AbstractNodeViewTask
The base class for all tasks that need to operate on a node view and possibly its associated network view. |
class |
AbstractRowTask
Base class for all tasks that need to operate on a CyRow . |
class |
AbstractTableCellTask
A base class for Tasks that need to operate on a single CyTable cell. |
class |
AbstractTableColumnTask
A base class for Tasks that need to operate on an entire CyTable column. |
class |
AbstractTableTask
A base class for Tasks that need to operate on an entire CyTable . |
Uses of Task in org.cytoscape.view.layout |
---|
Classes in org.cytoscape.view.layout that implement Task | |
---|---|
class |
AbstractLayoutTask
This is a basic implementation of a LayoutAlgorithm Task that does some bookkeeping, but primarily delegates to the doLayout() method. |
class |
AbstractPartitionLayoutTask
This is a more helpful implementation of a LayoutAlgorithm Task that extends AbstractBasicLayoutTask and does the work of partitioning the CyNetworkView so that partitions may be laid out individually. |
Uses of Task in org.cytoscape.work |
---|
Classes in org.cytoscape.work that implement Task | |
---|---|
class |
AbstractTask
A base class for tasks that need to be able to access the TaskIterator that contains them. |
Methods in org.cytoscape.work that return Task | |
---|---|
Task |
TaskIterator.next()
Returns the next Task in order if the TaskIterator can still yield more Tasks, otherwise throws an exception. |
Methods in org.cytoscape.work with parameters of type Task | |
---|---|
void |
TaskIterator.append(Task task)
Adds the given task to the end of this iterator. |
void |
TaskIterator.insertTasksAfter(Task referenceTask,
Task... newTasks)
Inserts "newTasks" immediately after "referenceTask". |
void |
TaskIterator.insertTasksAfter(Task referenceTask,
Task... newTasks)
Inserts "newTasks" immediately after "referenceTask". |
void |
TaskIterator.insertTasksAfter(Task referenceTask,
TaskIterator newTasks)
Inserts "newTasks" immediately after "referenceTask". |
protected void |
AbstractTask.insertTasksAfterCurrentTask(Task... newTasks)
Inserts "newTasks" after the current Task, in the TaskIterator that is being managed by this class. |
Constructors in org.cytoscape.work with parameters of type Task | |
---|---|
TaskIterator(int expectedNumTasks,
Task... initialTasks)
Constructs an iterator that will yield Tasks in the order that they were passed into this constructor. |
|
TaskIterator(Task... initialTasks)
Constructs an iterator that will yield Tasks in the order that they were passed into this constructor. |
|
Cytoscape 3.0.0-beta1 API | |||||||||
PREV NEXT | FRAMES NO FRAMES |