Cytoscape 3.0.1 API

Uses of Interface
org.cytoscape.model.CyRow

Packages that use CyRow
org.cytoscape.application.swing This package defines the various interfaces, abstract classes, and enums that represent the Cytoscape Swing Application API. 
org.cytoscape.model This package has the core interfaces of network and table data structures that are foundational to Cytoscape. 
org.cytoscape.model.events This package contains the event interfaces necessary for communicating with the classes in org.cytoscape.model. 
org.cytoscape.task This package provides base classes for common task factory types as well as their associated task types found in Cytoscape. 
org.cytoscape.view.layout This package provides access to the available layout algorithms, as well as provides abstract layout classes and layout information containers for the convenience of implementing other layout algorithms. 
org.cytoscape.view.vizmap Visual Mapping basic API module. 
org.cytoscape.view.vizmap.mappings APIs for different mapping functions -- continuous mapping, discrete mapping and pass through mapping. 
 

Uses of CyRow in org.cytoscape.application.swing
 

Constructor parameters in org.cytoscape.application.swing with type arguments of type CyRow
AbstractViewUpdater(VisualProperty<S> vp, String columnName, Map<CyRow,View<?>> rowViewMap)
          Constructor.
 

Uses of CyRow in org.cytoscape.model
 

Methods in org.cytoscape.model that return CyRow
 CyRow CyNetwork.getRow(CyIdentifiable entry)
          A convenience method that returns the row in the default table for this object.
 CyRow CyNetwork.getRow(CyIdentifiable entry, String namespace)
          Returns the row for the specified table name for this object.
 CyRow CyTable.getRow(Object primaryKey)
          Returns the row specified by the primary key object and if a row for the specified key does not yet exist in the table, a new row will be created and the new row will be returned.
 

Methods in org.cytoscape.model that return types with arguments of type CyRow
 List<CyRow> CyTable.getAllRows()
          Return a list of all the rows stored in this data table.
 Collection<CyRow> CyTable.getMatchingRows(String columnName, Object value)
          Returns all the rows of a specified column that contain a certain value for that column.
 

Uses of CyRow in org.cytoscape.model.events
 

Methods in org.cytoscape.model.events that return CyRow
 CyRow RowSetRecord.getRow()
          Returns the CyRow of the data that was set.
 

Constructors in org.cytoscape.model.events with parameters of type CyRow
RowSetRecord(CyRow row, String column, Object value, Object rawValue)
          Constructs a RowSetRecord.
 

Uses of CyRow in org.cytoscape.task
 

Fields in org.cytoscape.task declared as CyRow
protected  CyRow AbstractRowTask.row
          The row that descendants will operate on.
 

Methods in org.cytoscape.task with parameters of type CyRow
 TaskIterator RowTaskFactory.createTaskIterator(CyRow row)
          Provisions this factory with the CyRow that will be passed into any task created by it.
 boolean RowTaskFactory.isReady(CyRow row)
          Returns true if this task factory is ready to produce a TaskIterator.
 

Constructors in org.cytoscape.task with parameters of type CyRow
AbstractRowTask(CyRow row)
          Base class constructor for all tasks that need to be provisioned with a CyRow.
 

Uses of CyRow in org.cytoscape.view.layout
 

Methods in org.cytoscape.view.layout that return CyRow
 CyRow LayoutNode.getRow()
          Accessor function to return the CyRow associated with this LayoutNode.
 CyRow LayoutEdge.getRow()
          Return the CyRow for this LayoutEdge
 

Methods in org.cytoscape.view.layout with parameters of type CyRow
protected  void LayoutPartition.addEdge(CyEdge edge, CyRow row)
          Add an edge to this partition assuming that the source and target nodes are not yet known.
protected  void LayoutPartition.addEdge(CyEdge edge, LayoutNode v1, LayoutNode v2, CyRow row)
          Add an edge to this partition assuming that the source and target nodes are known.
 

Constructors in org.cytoscape.view.layout with parameters of type CyRow
LayoutEdge(CyEdge edge, CyRow row)
          Create a LayoutEdge that will contain information about this edge.
LayoutEdge(CyEdge edge, LayoutNode v1, LayoutNode v2, CyRow row)
          Create a LayoutEdge that will contains information about this edge, and that record that it connects LayoutNodes v1 and v2.
LayoutNode(View<CyNode> nodeView, int index, CyRow row)
          The main constructor for a LayoutNode.
 

Uses of CyRow in org.cytoscape.view.vizmap
 

Methods in org.cytoscape.view.vizmap with parameters of type CyRow
 void VisualStyle.apply(CyRow row, View<? extends CyIdentifiable> view)
          Apply Visual Property values only to the given View Object (node or edge).
 void VisualMappingFunction.apply(CyRow row, View<? extends CyIdentifiable> view)
          Apply mapping to the view model.
 V VisualMappingFunction.getMappedValue(CyRow row)
          Returns the mapped value for a CyRow.
 

Uses of CyRow in org.cytoscape.view.vizmap.mappings
 

Methods in org.cytoscape.view.vizmap.mappings with parameters of type CyRow
 void AbstractVisualMappingFunction.apply(CyRow row, View<? extends CyIdentifiable> view)
           
 


Cytoscape 3.0.1 API

Copyright 2011 Cytoscape Consortium. All rights reserved.