Uses of Interface
org.cytoscape.model.subnetwork.CySubNetwork

Packages that use CySubNetwork

Package	Description
org.cytoscape.model.subnetwork	This package contains rootnetwork and subnetwork extensions to the CyNetwork interface that provide a more complex meta-network data model.

Uses of CySubNetwork in org.cytoscape.model.subnetwork

Methods in org.cytoscape.model.subnetwork that return CySubNetwork

Modifier and Type	Method and Description
CySubNetwork	CyRootNetwork.addSubNetwork() Create an empty CySubNetwork.
CySubNetwork	CyRootNetwork.addSubNetwork(Iterable<CyNode> nodes, Iterable<CyEdge> edges) Create a CySubNetwork containing the specified CyNodes and CyEdges.
CySubNetwork	CyRootNetwork.addSubNetwork(Iterable<CyNode> nodes, Iterable<CyEdge> edges, SavePolicy policy) Create a CySubNetwork containing the specified CyNodes and CyEdges.
CySubNetwork	CyRootNetwork.addSubNetwork(SavePolicy policy) Create an empty CySubNetwork which can have a different save policy from that of this root network, as long as the root network's policy is not SavePolicy.DO_NOT_SAVE.
CySubNetwork	CyRootNetwork.getBaseNetwork() The initial network of CyNodes and CyEdges.

Methods in org.cytoscape.model.subnetwork that return types with arguments of type CySubNetwork

Modifier and Type	Method and Description
List<CySubNetwork>	CyRootNetwork.getSubNetworkList() Will return A list of all CySubNetworks contained in this root network.

Methods in org.cytoscape.model.subnetwork with parameters of type CySubNetwork

Modifier and Type	Method and Description
void	CyRootNetwork.removeSubNetwork(CySubNetwork sub) Removes the subnetwork from the root network, but not the nodes and edges contained in the subnetwork.