Uses of Interface
org.cytoscape.work.Task

Packages that use Task

Package	Description
org.cytoscape.io.read	Handle importing Cytoscape data (network, attributes, session, properties, etc) from files/URLs.
org.cytoscape.io.write	This package provides factory interfaces to be used by anyone wishing to provide export or writing capabilities to the rest of Cytoscape.
org.cytoscape.task	This package provides base classes for common task factory types as well as their associated task types found in Cytoscape.
org.cytoscape.view.layout	This package provides access to the available layout algorithms, as well as provides abstract layout classes and layout information containers for the convenience of implementing other layout algorithms.
org.cytoscape.work	This package defines the task framework, where tasks are units of work.

Uses of Task in org.cytoscape.io.read

Subinterfaces of Task in org.cytoscape.io.read

Modifier and Type	Interface and Description
interface	CyNetworkReader An extension of the Task interface that returns an array of CyNetwork objects that are read as part of the Task.
interface	CyPropertyReader An extension of the Task interface that returns a property object.
interface	CySessionReader An extension of the Task interface that returns a org.cytoscape.property.session.Cysession object.
interface	CyTableReader An extension of the Task interface that returns an array of CyTable objects.
interface	VizmapReader An extension of the Task interface that returns a VisualStyle object.

Uses of Task in org.cytoscape.io.write

Subinterfaces of Task in org.cytoscape.io.write

Modifier and Type	Interface and Description
interface	CyWriter A marker interface used to identify tasks involved in writing data.

Uses of Task in org.cytoscape.task

Classes in org.cytoscape.task that implement Task

Modifier and Type	Class and Description
class	AbstractEdgeViewTask The base class for all tasks that need to operate on an edge view and possibly its associated network view.
class	AbstractNetworkCollectionTask The base class for all tasks that need to operate on a Collection of CyNetworks.
class	AbstractNetworkTask Base class for all tasks that need to operate on a CyNetwork.
class	AbstractNetworkViewCollectionTask The base class for all tasks that need to operate on a Collection of CyNetworkViews.
class	AbstractNetworkViewTask The base class for all tasks that need to operate on a network view.
class	AbstractNodeViewTask The base class for all tasks that need to operate on a node view and possibly its associated network view.
class	AbstractRowTask Base class for all tasks that need to operate on a CyRow.
class	AbstractTableCellTask A base class for Tasks that need to operate on a single CyTable cell.
class	AbstractTableColumnTask A base class for Tasks that need to operate on an entire CyTable column.
class	AbstractTableTask A base class for Tasks that need to operate on an entire CyTable.

Uses of Task in org.cytoscape.view.layout

Classes in org.cytoscape.view.layout that implement Task

Modifier and Type	Class and Description
class	AbstractLayoutTask This is a basic implementation of a LayoutAlgorithm Task that does some bookkeeping, but primarily delegates to the doLayout() method.
class	AbstractPartitionLayoutTask This is a more helpful implementation of a LayoutAlgorithm Task that extends AbstractBasicLayoutTask and does the work of partitioning the CyNetworkView so that partitions may be laid out individually.

Uses of Task in org.cytoscape.work

Classes in org.cytoscape.work that implement Task

Modifier and Type	Class and Description
class	AbstractTask A base class for tasks that need to be able to access the TaskIterator that contains them.

Methods in org.cytoscape.work that return Task

Modifier and Type	Method and Description
Task	TaskIterator.next() Returns the next Task in order if the TaskIterator can still yield more Tasks, otherwise throws an exception.

Methods in org.cytoscape.work with parameters of type Task

Modifier and Type	Method and Description
void	TaskIterator.append(Task task) Adds the given task to the end of this iterator.
void	TaskIterator.insertTasksAfter(Task referenceTask, Task... newTasks) Inserts "newTasks" immediately after "referenceTask".
void	TaskIterator.insertTasksAfter(Task referenceTask, Task... newTasks) Inserts "newTasks" immediately after "referenceTask".
void	TaskIterator.insertTasksAfter(Task referenceTask, TaskIterator newTasks) Inserts "newTasks" immediately after "referenceTask".
protected void	AbstractTask.insertTasksAfterCurrentTask(Task... newTasks) Inserts "newTasks" after the current Task, in the TaskIterator that is being managed by this class.

Constructors in org.cytoscape.work with parameters of type Task

Constructor and Description
TaskIterator(int expectedNumTasks, Task... initialTasks) Constructs an iterator that will yield Tasks in the order that they were passed into this constructor.
TaskIterator(Task... initialTasks) Constructs an iterator that will yield Tasks in the order that they were passed into this constructor.