Constant Field Values

Contents

• org.cytoscape.*

org.cytoscape.*

org.cytoscape.application.CyVersion

public static final String	VERSION_PROPERTY_NAME	"cytoscape.version.number"
public static final String	VERSION_REGEX	"^(\\d+)\\.(\\d+)\\.(\\d+)([\\-\\.\\w]*)$"

org.cytoscape.application.NetworkViewRenderer

public static final String	BIRDS_EYE_CONTEXT	"birdsEye"
public static final String	DEFAULT_CONTEXT	""
public static final String	VISUAL_STYLE_PREVIEW_CONTEXT	"visualStylePreview"

org.cytoscape.application.swing.ActionEnableSupport

public static final String	ENABLE_FOR_ALWAYS	"always"
public static final String	ENABLE_FOR_NETWORK	"network"
public static final String	ENABLE_FOR_NETWORK_AND_VIEW	"networkAndView"
public static final String	ENABLE_FOR_NETWORK_WITHOUT_VIEW	"networkWithoutView"
public static final String	ENABLE_FOR_SELECTED_EDGES	"selectedEdges"
public static final String	ENABLE_FOR_SELECTED_NODES	"selectedNodes"
public static final String	ENABLE_FOR_SELECTED_NODES_OR_EDGES	"selectedNodesOrEdges"
public static final String	ENABLE_FOR_SINGLE_NETWORK	"singleNetwork"
public static final String	ENABLE_FOR_TABLE	"table"

org.cytoscape.event.CyEventHelper

public static final int

DEFAULT_PAYLOAD_INTERVAL_MILLIS

100

org.cytoscape.filter.transformers.Transformers

public static final String	COLUMN_FILTER	"org.cytoscape.ColumnFilter"
public static final String	DEGREE_FILTER	"org.cytoscape.DegreeFilter"
public static final String	INTERACTION_TRANSFORMER	"org.cytoscape.InteractionTransformer"
public static final String	TOPOLOGY_FILTER	"org.cytoscape.TopologyFilter"

org.cytoscape.io.util.StreamUtil

public static final String

URL_PATTERN

"^(jar\\:)?((http|https|ftp|file)+\\:\\/+\\S+)(\\!\\/\\S*)?$"

org.cytoscape.model.CyEdge

public static final String

INTERACTION

"interaction"

org.cytoscape.model.CyIdentifiable

public static final String

SUID

"SUID"

org.cytoscape.model.CyNetwork

public static final String	DEFAULT_ATTRS	"USER"
public static final String	HIDDEN_ATTRS	"HIDDEN"
public static final String	LOCAL_ATTRS	"LOCAL_ATTRS"
public static final String	NAME	"name"
public static final String	SELECTED	"selected"

org.cytoscape.model.subnetwork.CyRootNetwork

public static final String	SHARED_ATTRS	"SHARED_ATTRS"
public static final String	SHARED_DEFAULT_ATTRS	"SHARED_DEFAULT_ATTRS"
public static final String	SHARED_INTERACTION	"shared interaction"
public static final String	SHARED_NAME	"shared name"

org.cytoscape.property.CyProperty<P>

public static final String

DEFAULT_PROPS_CONFIG_DIR

"CytoscapeConfiguration"

org.cytoscape.property.SimpleCyProperty<P>

public static final String

CORE_PROPRERTY_NAME

"cytoscape 3"

org.cytoscape.util.swing.CheckBoxJList

public static final String

LIST_UPDATED

"LIST_UPDATED"

org.cytoscape.util.swing.FileUtil

public static final int	CUSTOM	1
public static final String	LAST_DIRECTORY	"directory.last"
public static final int	LOAD	0
public static final int	SAVE	1
public static final String	urlPattern	"^(jar\\:)?(\\w+\\:\\/+\\S+)(\\!\\/\\S*)?$"

org.cytoscape.util.swing.GravityTracker

public static final double

USE_ALPHABETIC_ORDER

-1.0

org.cytoscape.util.swing.OpenBrowser

public static final String

DEF_WEB_BROWSER_PROP_NAME

"defaultWebBrowser"

org.cytoscape.view.layout.AbstractLayoutTask

protected static final String

LAYOUT_ALGORITHM

"layoutAlgorithm"

org.cytoscape.view.layout.CyLayoutAlgorithmManager

public static final String	DEFAULT_LAYOUT_NAME	"grid"
public static final String	DEFAULT_LAYOUT_PROPERTY_NAME	"layout.default"

org.cytoscape.view.presentation.annotations.Annotation

public static final String	BACKGROUND	"background"
public static final String	CANVAS	"canvas"
public static final String	FOREGROUND	"foreground"
public static final String	X	"x"
public static final String	Y	"y"
public static final String	ZOOM	"zoom"

org.cytoscape.view.vizmap.gui.editor.EditorManager

public static final String	EDITOR_WINDOW_CLOSED	"EDITOR_WINDOW_CLOSED"
public static final String	EDITOR_WINDOW_OPENED	"EDITOR_WINDOW_OPENED"

org.cytoscape.view.vizmap.mappings.ContinuousMapping<K,V>

public static final String

CONTINUOUS

"Continuous Mapping"

org.cytoscape.view.vizmap.mappings.DiscreteMapping<K,V>

public static final String

DISCRETE

"Discrete Mapping"

org.cytoscape.view.vizmap.mappings.PassthroughMapping<K,V>

public static final String

PASSTHROUGH

"Passthrough Mapping"

org.cytoscape.work.AbstractTunableHandler

public static final String	CONTEXT	"context"
public static final String	GRAVITY	"gravity"
public static final String	TOOLTIP	"tooltip"

org.cytoscape.work.ServiceProperties

public static final String	ACCELERATOR	"accelerator"
public static final String	APPS_MENU	"Apps[1]"
public static final String	COMMAND	"command"
public static final String	COMMAND_NAMESPACE	"commandNamespace"
public static final String	EDGE_APPS_MENU	"Apps[1]"
public static final String	EDGE_DYNAMIC_LINKOUTS_MENU	"Dynamic Linkouts[1050]"
public static final String	EDGE_EDIT_MENU	"Edit[-1100]"
public static final String	EDGE_LINKOUTS_MENU	"External Links[1001]"
public static final String	EDGE_PREFERENCES_MENU	"Preferences[1100]"
public static final String	EDGE_SELECT_MENU	"Select[-1100]"
public static final String	ENABLE_FOR	"enableFor"
public static final String	ID	"id"
public static final String	IN_CONTEXT_MENU	"inContextMenu"
public static final String	IN_MENU_BAR	"inMenuBar"
public static final String	IN_NETWORK_PANEL_CONTEXT_MENU	"inNetworkPanelContextMenu"
public static final String	IN_TOOL_BAR	"inToolBar"
public static final String	INSERT_SEPARATOR_AFTER	"insertSeparatorAfter"
public static final String	INSERT_SEPARATOR_BEFORE	"insertSeparatorBefore"
public static final String	LARGE_ICON_URL	"largeIconURL"
public static final String	MENU_GRAVITY	"menuGravity"
public static final String	NETWORK_ADD_MENU	"Add[-1100]"
public static final String	NETWORK_APPS_MENU	"Apps[1]"
public static final String	NETWORK_DELETE_MENU	"Delete[-1090]"
public static final String	NETWORK_EDIT_MENU	"Edit[-1080]"
public static final String	NETWORK_GROUP_MENU	"Group[-1060]"
public static final String	NETWORK_LAYOUT_MENU	"Layout[-1050]"
public static final String	NETWORK_PREFERENCES_MENU	"Preferences[1000]"
public static final String	NETWORK_SELECT_MENU	"Select[-1070]"
public static final String	NODE_ADD_MENU	"Add[-1110]"
public static final String	NODE_APPS_MENU	"Apps[1]"
public static final String	NODE_DYNAMIC_LINKOUTS_MENU	"Dynamic Linkouts[1050]"
public static final String	NODE_EDIT_MENU	"Edit[-1100]"
public static final String	NODE_GROUP_MENU	"Group[-1080]"
public static final String	NODE_LINKOUTS_MENU	"External Links[1001]"
public static final String	NODE_NESTED_NETWORKS_MENU	"Nested Networks[-1070]"
public static final String	NODE_PREFERENCES_MENU	"Preferences[1100]"
public static final String	NODE_SELECT_MENU	"Select[-1090]"
public static final String	PREFERRED_ACTION	"preferredAction"
public static final String	PREFERRED_MENU	"preferredMenu"
public static final String	SMALL_ICON_URL	"smallIconURL"
public static final String	TITLE	"title"
public static final String	TOOL_BAR_GRAVITY	"toolBarGravity"
public static final String	TOOLTIP	"tooltip"