Constant Field Values

Contents

• org.cytoscape.*

org.cytoscape.*

org.cytoscape.application.CyVersion

Modifier and Type	Constant Field	Value
public static final String	VERSION_PROPERTY_NAME	"cytoscape.version.number"
public static final String	VERSION_REGEX	"^(\\d+)\\.(\\d+)\\.(\\d+)([\\-\\.\\w]*)$"

org.cytoscape.application.NetworkViewRenderer

Modifier and Type	Constant Field	Value
public static final String	BIRDS_EYE_CONTEXT	"birdsEye"
public static final String	DEFAULT_CONTEXT	""
public static final String	VISUAL_STYLE_PREVIEW_CONTEXT	"visualStylePreview"

org.cytoscape.application.swing.ActionEnableSupport

Modifier and Type	Constant Field	Value
public static final String	ENABLE_FOR_ALWAYS	"always"
public static final String	ENABLE_FOR_NETWORK	"network"
public static final String	ENABLE_FOR_NETWORK_AND_VIEW	"networkAndView"
public static final String	ENABLE_FOR_NETWORK_WITHOUT_VIEW	"networkWithoutView"
public static final String	ENABLE_FOR_SELECTED_EDGES	"selectedEdges"
public static final String	ENABLE_FOR_SELECTED_NODES	"selectedNodes"
public static final String	ENABLE_FOR_SELECTED_NODES_OR_EDGES	"selectedNodesOrEdges"
public static final String	ENABLE_FOR_SINGLE_NETWORK	"singleNetwork"
public static final String	ENABLE_FOR_TABLE	"table"

org.cytoscape.event.CyEventHelper

Modifier and Type	Constant Field	Value
public static final int	DEFAULT_PAYLOAD_INTERVAL_MILLIS	100

org.cytoscape.filter.transformers.Transformers

Modifier and Type	Constant Field	Value
public static final String	COLUMN_FILTER	"org.cytoscape.ColumnFilter"
public static final String	DEGREE_FILTER	"org.cytoscape.DegreeFilter"
public static final String	INTERACTION_TRANSFORMER	"org.cytoscape.InteractionTransformer"
public static final String	TOPOLOGY_FILTER	"org.cytoscape.TopologyFilter"

org.cytoscape.io.util.StreamUtil

Modifier and Type	Constant Field	Value
public static final String	URL_PATTERN	"^(jar\\:)?((http|https|ftp|file)+\\:\\/+\\S+)(\\!\\/\\S*)?$"

org.cytoscape.model.CyEdge

Modifier and Type	Constant Field	Value
public static final String	INTERACTION	"interaction"

org.cytoscape.model.CyIdentifiable

Modifier and Type	Constant Field	Value
public static final String	SUID	"SUID"

org.cytoscape.model.CyNetwork

Modifier and Type	Constant Field	Value
public static final String	DEFAULT_ATTRS	"USER"
public static final String	HIDDEN_ATTRS	"HIDDEN"
public static final String	LOCAL_ATTRS	"LOCAL_ATTRS"
public static final String	NAME	"name"
public static final String	SELECTED	"selected"

org.cytoscape.model.subnetwork.CyRootNetwork

Modifier and Type	Constant Field	Value
public static final String	SHARED_ATTRS	"SHARED_ATTRS"
public static final String	SHARED_DEFAULT_ATTRS	"SHARED_DEFAULT_ATTRS"
public static final String	SHARED_INTERACTION	"shared interaction"
public static final String	SHARED_NAME	"shared name"

org.cytoscape.property.CyProperty<P>

Modifier and Type	Constant Field	Value
public static final String	DEFAULT_PROPS_CONFIG_DIR	"CytoscapeConfiguration"

org.cytoscape.property.SimpleCyProperty<P>

Modifier and Type	Constant Field	Value
public static final String	CORE_PROPRERTY_NAME	"cytoscape 3"

org.cytoscape.util.swing.CheckBoxJList

Modifier and Type	Constant Field	Value
public static final String	LIST_UPDATED	"LIST_UPDATED"

org.cytoscape.util.swing.FileUtil

Modifier and Type	Constant Field	Value
public static final int	CUSTOM	1
public static final String	LAST_DIRECTORY	"directory.last"
public static final int	LOAD	0
public static final int	SAVE	1
public static final String	urlPattern	"^(jar\\:)?(\\w+\\:\\/+\\S+)(\\!\\/\\S*)?$"

org.cytoscape.util.swing.GravityTracker

Modifier and Type	Constant Field	Value
public static final double	USE_ALPHABETIC_ORDER	-1.0

org.cytoscape.util.swing.OpenBrowser

Modifier and Type	Constant Field	Value
public static final String	DEF_WEB_BROWSER_PROP_NAME	"defaultWebBrowser"

org.cytoscape.view.layout.AbstractLayoutTask

Modifier and Type	Constant Field	Value
protected static final String	LAYOUT_ALGORITHM	"layoutAlgorithm"

org.cytoscape.view.layout.CyLayoutAlgorithmManager

Modifier and Type	Constant Field	Value
public static final String	DEFAULT_LAYOUT_NAME	"grid"
public static final String	DEFAULT_LAYOUT_PROPERTY_NAME	"layout.default"

org.cytoscape.view.presentation.annotations.Annotation

Modifier and Type	Constant Field	Value
public static final String	BACKGROUND	"background"
public static final String	CANVAS	"canvas"
public static final String	FOREGROUND	"foreground"
public static final String	X	"x"
public static final String	Y	"y"
public static final String	ZOOM	"zoom"

org.cytoscape.view.presentation.annotations.GroupAnnotation

Modifier and Type	Constant Field	Value
public static final String	MEMBERS	"memberUUIDs"

org.cytoscape.view.presentation.annotations.ImageAnnotation

Modifier and Type	Constant Field	Value
public static final String	CONTRAST	"contrast"
public static final String	LIGHTNESS	"brightness"
public static final String	OPACITY	"opacity"
public static final String	URL	"URL"

org.cytoscape.view.presentation.annotations.ShapeAnnotation

Modifier and Type	Constant Field	Value
public static final String	CUSTOMSHAPE	"customShape"
public static final String	EDGECOLOR	"edgeColor"
public static final String	EDGEOPACITY	"edgeOpacity"
public static final String	EDGETHICKNESS	"edgeThickness"
public static final String	FILLCOLOR	"fillColor"
public static final String	FILLOPACITY	"fillOpacity"
public static final String	HEIGHT	"height"
public static final String	SHAPETYPE	"shapeType"
public static final String	WIDTH	"width"

org.cytoscape.view.presentation.annotations.TextAnnotation

Modifier and Type	Constant Field	Value
public static final String	COLOR	"color"
public static final String	FONTFAMILY	"fontFamily"
public static final String	FONTSIZE	"fontSize"
public static final String	FONTSTYLE	"fontStyle"
public static final String	TEXT	"text"

org.cytoscape.view.presentation.customgraphics.CyCustomGraphics2Factory<T extends CustomGraphicLayer>

Modifier and Type	Constant Field	Value
public static final String	GROUP	"group"

org.cytoscape.view.vizmap.gui.editor.EditorManager

Modifier and Type	Constant Field	Value
public static final String	EDITOR_WINDOW_CLOSED	"EDITOR_WINDOW_CLOSED"
public static final String	EDITOR_WINDOW_OPENED	"EDITOR_WINDOW_OPENED"

org.cytoscape.view.vizmap.mappings.ContinuousMapping<K,V>

Modifier and Type	Constant Field	Value
public static final String	CONTINUOUS	"Continuous Mapping"

org.cytoscape.view.vizmap.mappings.DiscreteMapping<K,V>

Modifier and Type	Constant Field	Value
public static final String	DISCRETE	"Discrete Mapping"

org.cytoscape.view.vizmap.mappings.PassthroughMapping<K,V>

Modifier and Type	Constant Field	Value
public static final String	PASSTHROUGH	"Passthrough Mapping"

org.cytoscape.work.AbstractTunableHandler

Modifier and Type	Constant Field	Value
public static final String	CONTEXT	"context"
public static final String	FORMAT	"format"
public static final String	GRAVITY	"gravity"
public static final String	TOOLTIP	"tooltip"

org.cytoscape.work.ServiceProperties

Modifier and Type	Constant Field	Value
public static final String	ACCELERATOR	"accelerator"
public static final String	APPS_MENU	"Apps[1]"
public static final String	COMMAND	"command"
public static final String	COMMAND_DESCRIPTION	"commandDescription"
public static final String	COMMAND_NAMESPACE	"commandNamespace"
public static final String	EDGE_APPS_MENU	"Apps[1]"
public static final String	EDGE_DYNAMIC_LINKOUTS_MENU	"Dynamic Linkouts[1050]"
public static final String	EDGE_EDIT_MENU	"Edit[-1100]"
public static final String	EDGE_LINKOUTS_MENU	"External Links[1001]"
public static final String	EDGE_PREFERENCES_MENU	"Preferences[1100]"
public static final String	EDGE_SELECT_MENU	"Select[-1100]"
public static final String	ENABLE_FOR	"enableFor"
public static final String	ID	"id"
public static final String	IN_CONTEXT_MENU	"inContextMenu"
public static final String	IN_MENU_BAR	"inMenuBar"
public static final String	IN_NETWORK_PANEL_CONTEXT_MENU	"inNetworkPanelContextMenu"
public static final String	IN_TOOL_BAR	"inToolBar"
public static final String	INSERT_SEPARATOR_AFTER	"insertSeparatorAfter"
public static final String	INSERT_SEPARATOR_BEFORE	"insertSeparatorBefore"
public static final String	LARGE_ICON_URL	"largeIconURL"
public static final String	MENU_GRAVITY	"menuGravity"
public static final String	NETWORK_ADD_MENU	"Add[-1100]"
public static final String	NETWORK_APPS_MENU	"Apps[1]"
public static final String	NETWORK_DELETE_MENU	"Delete[-1090]"
public static final String	NETWORK_EDIT_MENU	"Edit[-1080]"
public static final String	NETWORK_GROUP_MENU	"Group[-1060]"
public static final String	NETWORK_LAYOUT_MENU	"Layout[-1050]"
public static final String	NETWORK_PREFERENCES_MENU	"Preferences[1000]"
public static final String	NETWORK_SELECT_MENU	"Select[-1070]"
public static final String	NODE_ADD_MENU	"Add[-1110]"
public static final String	NODE_APPS_MENU	"Apps[1]"
public static final String	NODE_DYNAMIC_LINKOUTS_MENU	"Dynamic Linkouts[1050]"
public static final String	NODE_EDIT_MENU	"Edit[-1100]"
public static final String	NODE_GROUP_MENU	"Group[-1080]"
public static final String	NODE_LINKOUTS_MENU	"External Links[1001]"
public static final String	NODE_NESTED_NETWORKS_MENU	"Nested Networks[-1070]"
public static final String	NODE_PREFERENCES_MENU	"Preferences[1100]"
public static final String	NODE_SELECT_MENU	"Select[-1090]"
public static final String	PREFERRED_ACTION	"preferredAction"
public static final String	PREFERRED_MENU	"preferredMenu"
public static final String	SMALL_ICON_URL	"smallIconURL"
public static final String	TITLE	"title"
public static final String	TOOL_BAR_GRAVITY	"toolBarGravity"
public static final String	TOOLTIP	"tooltip"

org.cytoscape.work.Tunable

Modifier and Type	Constant Field	Value
public static final String	BOTH_CONTEXT	"both"
public static final String	GUI_CONTEXT	"gui"
public static final String	NOGUI_CONTEXT	"nogui"