public interface CyAppAdapter
Module: app-api
To use this in your app, include the following dependency in your POM:
<dependency> <groupId>org.cytoscape</groupId> <artifactId>app-api</artifactId> </dependency>
CyApplicationConfiguration getCyApplicationConfiguration()
CyNetworkFactory getCyNetworkFactory()
CyNetworkFactory
.CyNetworkFactory
.CyTableFactory getCyTableFactory()
CyTableFactory
.CyTableFactory
.CyTableManager getCyTableManager()
CyTableManager
.CyTableManager
.CyRootNetworkManager getCyRootNetworkManager()
CyRootNetworkManager
.CyRootNetworkManager
.CyEventHelper getCyEventHelper()
CyEventHelper
.CyEventHelper
.CyNetworkManager getCyNetworkManager()
CyNetworkManager
.CyNetworkManager
.CyGroupFactory getCyGroupFactory()
CyGroupFactory
.CyGroupFactory
.CyGroupAggregationManager getCyGroupAggregationManager()
CyGroupAggregationManager
.CyGroupAggregationManager
.CyGroupManager getCyGroupManager()
CyGroupManager
.CyGroupManager
.CyNetworkViewFactory getCyNetworkViewFactory()
CyNetworkViewFactory
.CyNetworkViewFactory
.CyNetworkViewManager getCyNetworkViewManager()
CyNetworkViewManager
.CyNetworkViewManager
.CyApplicationManager getCyApplicationManager()
CyApplicationManager
.CyApplicationManager
.CySessionManager getCySessionManager()
CySessionManager
.CySessionManager
.TaskManager getTaskManager()
TaskManager
.TaskManager
.UndoSupport getUndoSupport()
UndoSupport
.UndoSupport
.TunablePropertySerializerFactory getTunablePropertySerializerFactory()
TunablePropertySerializerFactory
.TunablePropertySerializerFactory
.RenderingEngineManager getRenderingEngineManager()
RenderingEngineManager
.RenderingEngineManager
.VisualMappingManager getVisualMappingManager()
VisualMappingManager
.VisualMappingManager
.VisualStyleFactory getVisualStyleFactory()
VisualStyleFactory
.VisualStyleFactory
.VisualMappingFunctionFactory getVisualMappingFunctionContinuousFactory()
VisualMappingFunctionFactory
.VisualMappingFunctionFactory
.VisualMappingFunctionFactory getVisualMappingFunctionDiscreteFactory()
VisualMappingFunctionFactory
.VisualMappingFunctionFactory
.VisualMappingFunctionFactory getVisualMappingFunctionPassthroughFactory()
VisualMappingFunctionFactory
.VisualMappingFunctionFactory
.CyLayoutAlgorithmManager getCyLayoutAlgorithmManager()
CyLayoutAlgorithmManager
.CyLayoutAlgorithmManager
.CyProperty<Properties> getCoreProperties()
CyProperty
of type Properties.CyProperty
of type Properties.CyNetworkReaderManager getCyNetworkViewReaderManager()
CyNetworkReaderManager
.CyNetworkReaderManager
.CyPropertyReaderManager getCyPropertyReaderManager()
CyPropertyReaderManager
.CyPropertyReaderManager
.CySessionReaderManager getCySessionReaderManager()
CySessionReaderManager
.CySessionReaderManager
.CyTableReaderManager getCyTableReaderManager()
CyTableReaderManager
.CyTableReaderManager
.CyNetworkViewWriterManager getCyNetworkViewWriterManager()
CyNetworkViewWriterManager
.CyNetworkViewWriterManager
.CyPropertyWriterManager getCyPropertyWriterManager()
CyPropertyWriterManager
.CyPropertyWriterManager
.CySessionWriterManager getCySessionWriterManager()
CySessionWriterManager
.CySessionWriterManager
.CyTableWriterManager getCyTableWriterManager()
CyTableWriterManager
.CyTableWriterManager
.PresentationWriterManager getPresentationWriterManager()
PresentationWriterManager
.PresentationWriterManager
.StreamUtil getStreamUtil()
StreamUtil
.StreamUtil
.CyServiceRegistrar getCyServiceRegistrar()
CyServiceRegistrar
.CyServiceRegistrar
.CyVersion getCyVersion()
CyVersion
.CyVersion
.DataSourceManager getDataSourceManager()
DataSourceManager
.DataSourceManager
.AvailableCommands getAvailableCommands()
AvailableCommands
.AvailableCommands
.CommandExecutorTaskFactory getCommandExecutorTaskFactory()
CommandExecutorTaskFactory
which can be used
to execute commands.CommandExecutorTaskFactory
.ApplyVisualStyleTaskFactory get_ApplyVisualStyleTaskFactory()
ApplyVisualStyleTaskFactory
.ApplyVisualStyleTaskFactory
.MapGlobalToLocalTableTaskFactory get_MapGlobalToLocalTableTaskFactory()
MapGlobalToLocalTableTaskFactory
.MapGlobalToLocalTableTaskFactory
.LoadNetworkFileTaskFactory get_LoadNetworkFileTaskFactory()
LoadNetworkFileTaskFactory
.LoadNetworkFileTaskFactory
.LoadNetworkURLTaskFactory get_LoadNetworkURLTaskFactory()
LoadNetworkURLTaskFactory
.LoadNetworkURLTaskFactory
.LoadVizmapFileTaskFactory get_LoadVizmapFileTaskFactory()
LoadVizmapFileTaskFactory
.LoadVizmapFileTaskFactory
.LoadTableFileTaskFactory get_LoadTableFileTaskFactory()
LoadTableFileTaskFactory
.LoadTableFileTaskFactory
.LoadTableURLTaskFactory get_LoadTableURLTaskFactory()
LoadTableURLTaskFactory
.LoadTableURLTaskFactory
.DeleteSelectedNodesAndEdgesTaskFactory get_DeleteSelectedNodesAndEdgesTaskFactory()
DeleteSelectedNodesAndEdgesTaskFactory
.DeleteSelectedNodesAndEdgesTaskFactory
.SelectAllTaskFactory get_SelectAllTaskFactory()
SelectAllTaskFactory
.SelectAllTaskFactory
.SelectAllEdgesTaskFactory get_SelectAllEdgesTaskFactory()
SelectAllEdgesTaskFactory
.SelectAllEdgesTaskFactory
.SelectAllNodesTaskFactory get_SelectAllNodesTaskFactory()
SelectAllNodesTaskFactory
.SelectAllNodesTaskFactory
.SelectAdjacentEdgesTaskFactory get_SelectAdjacentEdgesTaskFactory()
SelectAdjacentEdgesTaskFactory
.SelectAdjacentEdgesTaskFactory
.SelectConnectedNodesTaskFactory get_SelectConnectedNodesTaskFactory()
SelectConnectedNodesTaskFactory
.SelectConnectedNodesTaskFactory
.SelectFirstNeighborsTaskFactory get_SelectFirstNeighborsTaskFactory()
SelectFirstNeighborsTaskFactory
.SelectFirstNeighborsTaskFactory
.SelectFirstNeighborsTaskFactory get_SelectFirstNeighborsTaskFactoryInEdge()
SelectFirstNeighborsTaskFactory
.SelectFirstNeighborsTaskFactory
.SelectFirstNeighborsTaskFactory get_SelectFirstNeighborsTaskFactoryOutEdge()
SelectFirstNeighborsTaskFactory
.SelectFirstNeighborsTaskFactory
.DeselectAllTaskFactory get_DeselectAllTaskFactory()
DeselectAllTaskFactory
.DeselectAllTaskFactory
.DeselectAllEdgesTaskFactory get_DeselectAllEdgesTaskFactory()
DeselectAllEdgesTaskFactory
.DeselectAllEdgesTaskFactory
.DeselectAllNodesTaskFactory get_DeselectAllNodesTaskFactory()
DeselectAllNodesTaskFactory
.DeselectAllNodesTaskFactory
.InvertSelectedEdgesTaskFactory get_InvertSelectedEdgesTaskFactory()
InvertSelectedEdgesTaskFactory
.InvertSelectedEdgesTaskFactory
.InvertSelectedNodesTaskFactory get_InvertSelectedNodesTaskFactory()
InvertSelectedNodesTaskFactory
.InvertSelectedNodesTaskFactory
.SelectFromFileListTaskFactory get_SelectFromFileListTaskFactory()
SelectFromFileListTaskFactory
.SelectFromFileListTaskFactory
.SelectFirstNeighborsNodeViewTaskFactory get_SelectFirstNeighborsNodeViewTaskFactory()
SelectFirstNeighborsNodeViewTaskFactory
.SelectFirstNeighborsNodeViewTaskFactory
.HideSelectedTaskFactory get_HideSelectedTaskFactory()
HideSelectedTaskFactory
.HideSelectedTaskFactory
.HideSelectedNodesTaskFactory get_HideSelectedNodesTaskFactory()
HideSelectedNodesTaskFactory
.HideSelectedNodesTaskFactory
.HideSelectedEdgesTaskFactory get_HideSelectedEdgesTaskFactory()
HideSelectedEdgesTaskFactory
.HideSelectedEdgesTaskFactory
.UnHideAllTaskFactory get_UnHideAllTaskFactory()
UnHideAllTaskFactory
.UnHideAllTaskFactory
.UnHideAllNodesTaskFactory get_UnHideAllNodesTaskFactory()
UnHideAllNodesTaskFactory
.UnHideAllNodesTaskFactory
.UnHideAllEdgesTaskFactory get_UnHideAllEdgesTaskFactory()
UnHideAllEdgesTaskFactory
.UnHideAllEdgesTaskFactory
.NewEmptyNetworkViewFactory get_NewEmptyNetworkViewFactory()
NewEmptyNetworkViewFactory
.NewEmptyNetworkViewFactory
.NewNetworkSelectedNodesAndEdgesTaskFactory get_NewNetworkSelectedNodesAndEdgesTaskFactory()
NewNetworkSelectedNodesAndEdgesTaskFactory
.NewNetworkSelectedNodesAndEdgesTaskFactory
.NewNetworkSelectedNodesOnlyTaskFactory get_NewNetworkSelectedNodesOnlyTaskFactory()
NewNetworkSelectedNodesOnlyTaskFactory
.NewNetworkSelectedNodesOnlyTaskFactory
.CloneNetworkTaskFactory get_CloneNetworkTaskFactory()
CloneNetworkTaskFactory
.CloneNetworkTaskFactory
.DestroyNetworkTaskFactory get_DestroyNetworkTaskFactory()
DestroyNetworkTaskFactory
.DestroyNetworkTaskFactory
.DestroyNetworkViewTaskFactory get_DestroyNetworkViewTaskFactory()
DestroyNetworkViewTaskFactory
.DestroyNetworkViewTaskFactory
.EditNetworkTitleTaskFactory get_EditNetworkTitleTaskFactory()
EditNetworkTitleTaskFactory
.EditNetworkTitleTaskFactory
.CreateNetworkViewTaskFactory get_CreateNetworkViewTaskFactory()
CreateNetworkViewTaskFactory
.CreateNetworkViewTaskFactory
.ExportNetworkImageTaskFactory get_ExportNetworkImageTaskFactory()
ExportNetworkImageTaskFactory
.ExportNetworkImageTaskFactory
.ExportNetworkViewTaskFactory get_ExportNetworkViewTaskFactory()
ExportNetworkViewTaskFactory
.ExportNetworkViewTaskFactory
.ExportSelectedTableTaskFactory get_ExportSelectedTableTaskFactory()
ExportSelectedTableTaskFactory
.ExportSelectedTableTaskFactory
.ExportTableTaskFactory get_ExportTableTaskFactory()
ExportTableTaskFactory
.ExportTableTaskFactory
.ExportVizmapTaskFactory get_ExportVizmapTaskFactory()
ExportVizmapTaskFactory
.ExportVizmapTaskFactory
.NewSessionTaskFactory get_NewSessionTaskFactory()
NewSessionTaskFactory
.NewSessionTaskFactory
.OpenSessionTaskFactory get_OpenSessionTaskFactory()
OpenSessionTaskFactory
.OpenSessionTaskFactory
.SaveSessionAsTaskFactory get_SaveSessionAsTaskFactory()
SaveSessionAsTaskFactory
.SaveSessionAsTaskFactory
.ApplyPreferredLayoutTaskFactory get_ApplyPreferredLayoutTaskFactory()
ApplyPreferredLayoutTaskFactory
.ApplyPreferredLayoutTaskFactory
.DeleteColumnTaskFactory get_DeleteColumnTaskFactory()
DeleteColumnTaskFactory
.DeleteColumnTaskFactory
.RenameColumnTaskFactory get_RenameColumnTaskFactory()
RenameColumnTaskFactory
.RenameColumnTaskFactory
.DeleteTableTaskFactory get_DeleteTableTaskFactory()
DeleteTableTaskFactory
.DeleteTableTaskFactory
.ConnectSelectedNodesTaskFactory get_ConnectSelectedNodesTaskFactory()
ConnectSelectedNodesTaskFactory
.ConnectSelectedNodesTaskFactory
.GroupNodesTaskFactory get_GroupNodesTaskFactory()
GroupNodesTaskFactory
.GroupNodesTaskFactory
.UnGroupTaskFactory get_UnGroupTaskFactory()
UnGroupTaskFactory
.UnGroupTaskFactory
.CollapseGroupTaskFactory get_CollapseGroupTaskFactory()
CollapseGroupTaskFactory
.CollapseGroupTaskFactory
.ExpandGroupTaskFactory get_ExpandGroupTaskFactory()
ExpandGroupTaskFactory
.ExpandGroupTaskFactory
.UnGroupNodesTaskFactory get_UnGroupNodesTaskFactory()
UnGroupNodesTaskFactory
.UnGroupNodesTaskFactory
.MapTableToNetworkTablesTaskFactory get_MapTableToNetworkTablesTaskFactory()
MapTableToNetworkTablesTaskFactory
.MapTableToNetworkTablesTaskFactory
.Copyright 2011-2015 Cytoscape Consortium. All rights reserved.