Package | Description |
---|---|
org.cytoscape.filter |
Provides interfaces for constructing and executing
Transformer s and
Filter s. |
org.cytoscape.filter.model |
Provides interfaces and classes for defining
Transformer s and
Filter s. |
org.cytoscape.filter.view |
Provides interfaces for contributing user interfaces for
Transformer s to
Cytoscape. |
org.cytoscape.io.read |
Handle importing Cytoscape data (network, attributes, session, properties, etc) from files/URLs.
|
org.cytoscape.io.write |
This package provides factory interfaces to be used by anyone wishing to provide
export or writing capabilities to the rest of Cytoscape.
|
Class and Description |
---|
CompositeFilter |
Transformer
Transforms a stream of elements from a particular context.
|
TransformerSink
Collects the results of a transformation.
|
TransformerSource
Provides a sequence of elements from a context.
|
Class and Description |
---|
CompositeFilter |
CompositeFilter.Type
Determines how a
CompositeFilter combines the results of its
contained Filter s. |
ElementTransformer
A transformer that transforms its input one element at a time and pushes
the results into the given sink.
|
Filter
A transformer that decides whether to accept or reject elements.
|
HolisticTransformer
A transformer that takes its input altogether, transforms it, and pushes
the results into the given sink.
|
Transformer
Transforms a stream of elements from a particular context.
|
TransformerFactory
The base interface for all
Transformer factories. |
TransformerListener
Listens for changes to
Transformer parameters. |
TransformerSink
Collects the results of a transformation.
|
TransformerSource
Provides a sequence of elements from a context.
|
Class and Description |
---|
Transformer
Transforms a stream of elements from a particular context.
|
Class and Description |
---|
NamedTransformer
A chain of
Transformer s with a user-defined name. |
Class and Description |
---|
NamedTransformer
A chain of
Transformer s with a user-defined name. |
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