Package | Description |
---|---|
org.cytoscape.app |
This is the Cytoscape App API, which supports development of Cytoscape 3.X
apps in a manner similar to apps developed in Cytoscape 2.X.
|
org.cytoscape.view.layout |
This package provides access to the available layout algorithms, as well as provides abstract layout
classes and layout information containers for the convenience of implementing other layout algorithms.
|
Class and Description |
---|
CyLayoutAlgorithmManager
This class provides access to the available layout algorithms.
|
Class and Description |
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AbstractLayoutTask
This is a basic implementation of a LayoutAlgorithm Task that does some
bookkeeping, but primarily delegates to the doLayout() method.
|
AbstractPartitionLayoutTask
This is a more helpful implementation of a LayoutAlgorithm Task
that extends AbstractBasicLayoutTask and does the work of partitioning
the CyNetworkView so that partitions may be laid out individually.
|
CyLayoutAlgorithm
A task factory specifically for layout algorithms.
|
EdgeWeighter
The EdgeWeighter class.
|
LayoutEdge
The LayoutEdge class.
|
LayoutNode
The LayoutNode class.
|
LayoutPartition
The LayoutPartition class contains all of the information about a
single graph partition, where a partition is defined as all nodes
in a graph that connect only to each other.
|
LayoutPoint
Simple immutable object which represents a point (x, y, z).
|
WeightTypes
An enum describing different weighting strategies.
|
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