Package | Description |
---|---|
org.cytoscape.jobs |
This package provides a mechanism for executing remote jobs from within Cytoscape.
|
org.cytoscape.view.layout |
This package provides access to the available layout algorithms, as well as provides abstract layout
classes and layout information containers for the convenience of implementing other layout algorithms.
|
org.cytoscape.work |
This package defines the task framework, where tasks are units of work.
|
Modifier and Type | Method and Description |
---|---|
void |
CyJobMonitor.loadData(CyJob job,
TaskMonitor taskMonitor)
This method is called when when the job status transitions
to
FINISHED and the user has indicated
that they are ready to load the data from the task. |
Modifier and Type | Field and Description |
---|---|
protected TaskMonitor |
AbstractPartitionLayoutTask.taskMonitor
The TaskMonitor initially set in the run method of the task.
|
Modifier and Type | Method and Description |
---|---|
void |
AbstractPartitionLayoutTask.doLayout(TaskMonitor taskMonitor)
AbstractGraphPartitionLayout implements the doLayout method
of AbstractBasicLayout in which it calls the layoutParition
method on each LayoutPartition object created for the network.
|
void |
AbstractParallelPartitionLayoutTask.doLayout(TaskMonitor taskMonitor)
AbstractGraphPartitionLayout implements the doLayout method
of AbstractBasicLayout in which it calls the layoutParition
method on each LayoutPartition object created for the network.
|
protected abstract void |
AbstractLayoutTask.doLayout(TaskMonitor taskMonitor)
This method is designed to actually encapsulate the layout algorithm.
|
void |
AbstractLayoutTask.run(TaskMonitor taskMonitor)
This method is called when the
Task begins execution. |
Modifier and Type | Method and Description |
---|---|
void |
Task.run(TaskMonitor taskMonitor)
This method is called when the
Task begins execution. |
abstract void |
AbstractTask.run(TaskMonitor taskMonitor)
This method is called when the
Task begins execution. |
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