cytoscape.data.readers
Interface GraphReader

All Known Implementing Classes:

GMLReader2, InteractionsReader, XGMMLReader

public interface GraphReader

Method Summary

CyAttributes	getEdgeAttributes()
int[]	getEdgeIndicesArray()
CyAttributes	getNodeAttributes()
int[]	getNodeIndicesArray()
giny.model.RootGraph	getRootGraph()
void	layout(giny.view.GraphView myView)
void	read()
void	read(boolean canonicalizeNodeNames)

Method Detail

read

void read()
          throws IOException

Throws:

IOException

read

void read(boolean canonicalizeNodeNames)
          throws IOException

Throws:

IOException

getRootGraph

giny.model.RootGraph getRootGraph()

getNodeAttributes

CyAttributes getNodeAttributes()

getEdgeAttributes

CyAttributes getEdgeAttributes()

layout

void layout(giny.view.GraphView myView)

getNodeIndicesArray

int[] getNodeIndicesArray()

getEdgeIndicesArray

int[] getEdgeIndicesArray()