Package cytoscape.data.readers

Reader classes for the basic data types in cytoscape.data.

See:
Description

Interface Summary

GraphReader

Class Summary

CyAttributesReader
CytoscapeSessionReader	Cytoscape Session Reader.
GMLNode	This class represents a GMLNode.
GMLParser	The purpose of hte class is to translate gml into an object tree, and print out an object treee into GML
GMLReader2	This class is responsible for converting a gml object tree into cytoscape objects New features to the current version: 1.
GMLTree	This class wraps around GMLNode and provides various methods for constructing a tree structure given other data.
GMLWriter	The purpse of this class is to translate cytoscape data structures into a gml object tree, we can then use the gml parser to write this tree out into a file
InteractionsReader	Reader for graphs in the interactions file format.
KeyValue
MetadataParser	This class manipulates network meta data.
TextFileReader
TextHttpReader
TextJarReader
VisualStyleBuilder	Based on the graph/node/edge view information, build new Visual Style.
XGMMLReader	XGMMLReader.

Exception Summary

GMLException

Package cytoscape.data.readers Description

Reader classes for the basic data types in cytoscape.data.