Cytoscape 2.6.2 (c) 2006,2007 ISB, MSKCC, UCSD

cytoscape.data.ontology
Class OntologyFactory

java.lang.Object
  extended by cytoscape.data.ontology.OntologyFactory

public class OntologyFactory
extends Object


Constructor Summary
OntologyFactory()
           
 
Method Summary
 Ontology createBasicOntology(URL dataSource, String name, String description)
          DOCUMENT ME!
 GeneOntology createGeneOntology(URL dataSource, String name, String description)
          DOCUMENT ME!
 
Methods inherited from class java.lang.Object
equals, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait
 

Constructor Detail

OntologyFactory

public OntologyFactory()
Method Detail

createBasicOntology

public Ontology createBasicOntology(URL dataSource,
                                    String name,
                                    String description)
                             throws IOException,
                                    URISyntaxException
DOCUMENT ME!

Parameters:
dataSource - DOCUMENT ME!
name - DOCUMENT ME!
description - DOCUMENT ME!
Returns:
DOCUMENT ME!
Throws:
IOException - DOCUMENT ME!
URISyntaxException - DOCUMENT ME!

createGeneOntology

public GeneOntology createGeneOntology(URL dataSource,
                                       String name,
                                       String description)
                                throws IOException,
                                       URISyntaxException
DOCUMENT ME!

Parameters:
dataSource - DOCUMENT ME!
name - DOCUMENT ME!
description - DOCUMENT ME!
Returns:
DOCUMENT ME!
Throws:
IOException - DOCUMENT ME!
URISyntaxException - DOCUMENT ME!

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