cytoscape.data.ontology
Class Triple

java.lang.Object
  org.biojava.utils.AbstractChangeable
      cytoscape.data.ontology.Triple

All Implemented Interfaces:

org.biojava.bio.Annotatable, org.biojava.ontology.Term, org.biojava.ontology.Triple, org.biojava.utils.Changeable

public class Triple
extends org.biojava.utils.AbstractChangeable
implements org.biojava.ontology.Triple

Extract partial graph structure.

Since:

Cytoscape 2.4

Version:

0.5

Author:

kono

Nested Class Summary

Nested classes/interfaces inherited from interface org.biojava.ontology.Triple

org.biojava.ontology.Triple.Impl

Nested classes/interfaces inherited from interface org.biojava.bio.Annotatable

org.biojava.bio.Annotatable.AnnotationForwarder

Field Summary

Fields inherited from interface org.biojava.ontology.Term

ONTOLOGY

Fields inherited from interface org.biojava.bio.Annotatable

ANNOTATION

Constructor Summary

Triple(org.biojava.ontology.Term subject, org.biojava.ontology.Term object, org.biojava.ontology.Term predicate, String name, String description)
Creates a new Triple object.

Method Summary

void	addSynonym(Object arg0) Triple synonym is not supported.
org.biojava.bio.Annotation	getAnnotation() Always return empty annotation object.
String	getDescription() Description for triple is not supported.
String	getName() Returns human-readable name of this triple.
org.biojava.ontology.Term	getObject() DOCUMENT ME!
org.biojava.ontology.Ontology	getOntology() Returns ontology which this triple belongs to.
org.biojava.ontology.Term	getPredicate() DOCUMENT ME!
org.biojava.ontology.Term	getSubject() DOCUMENT ME!
Object[]	getSynonyms() Synonym is not supported.
void	removeSynonym(Object arg0) Not supported.
String	toString() DOCUMENT ME!

Methods inherited from class org.biojava.utils.AbstractChangeable

addChangeListener, addChangeListener, isUnchanging, removeChangeListener, removeChangeListener

Methods inherited from class java.lang.Object

equals, getClass, hashCode, notify, notifyAll, wait, wait, wait

Methods inherited from interface org.biojava.ontology.Triple

equals, hashCode

Methods inherited from interface org.biojava.utils.Changeable

addChangeListener, addChangeListener, isUnchanging, removeChangeListener, removeChangeListener

Constructor Detail

Triple

public Triple(org.biojava.ontology.Term subject,
              org.biojava.ontology.Term object,
              org.biojava.ontology.Term predicate,
              String name,
              String description)

Creates a new Triple object.

Parameters:

subject - DOCUMENT ME!

object - DOCUMENT ME!

predicate - DOCUMENT ME!

name - DOCUMENT ME!

description - DOCUMENT ME!

Method Detail

getObject

public org.biojava.ontology.Term getObject()

DOCUMENT ME!

Specified by:

getObject in interface org.biojava.ontology.Triple

Returns:

DOCUMENT ME!

getPredicate

public org.biojava.ontology.Term getPredicate()

DOCUMENT ME!

Specified by:

getPredicate in interface org.biojava.ontology.Triple

Returns:

DOCUMENT ME!

getSubject

public org.biojava.ontology.Term getSubject()

DOCUMENT ME!

Specified by:

getSubject in interface org.biojava.ontology.Triple

Returns:

DOCUMENT ME!

addSynonym

public void addSynonym(Object arg0)

Triple synonym is not supported.

Specified by:

addSynonym in interface org.biojava.ontology.Term

getDescription

public String getDescription()

Description for triple is not supported.

Specified by:

getDescription in interface org.biojava.ontology.Term

getName

public String getName()

Returns human-readable name of this triple.

Specified by:

getName in interface org.biojava.ontology.Term

getOntology

public org.biojava.ontology.Ontology getOntology()

Returns ontology which this triple belongs to.

Specified by:

getOntology in interface org.biojava.ontology.Term

getSynonyms

public Object[] getSynonyms()

Synonym is not supported.

Specified by:

getSynonyms in interface org.biojava.ontology.Term

removeSynonym

public void removeSynonym(Object arg0)

Not supported.

Specified by:

removeSynonym in interface org.biojava.ontology.Term

getAnnotation

public org.biojava.bio.Annotation getAnnotation()

Always return empty annotation object.

Specified by:

getAnnotation in interface org.biojava.bio.Annotatable

toString

public String toString()

DOCUMENT ME!

Overrides:

toString in class Object

Returns:

DOCUMENT ME!