cytoscape.util
Class JnlpWriterUtil

java.lang.Object
  cytoscape.util.JnlpWriterUtil

public class JnlpWriterUtil
extends Object

Field Summary

protected String	cytoDir
org.jdom.Document	document
protected String	fileName
String	libDir
protected HashMap<String,String>	options
org.jdom.output.XMLOutputter	out
String	pluginDir
org.jdom.Element	rootTag
protected String	saveDir
protected String	url

Constructor Summary

JnlpWriterUtil(String[] args)
Creates a new JnlpWriterUtil object.

Method Summary

void	addArguments(ArrayList<String> Args)
void	addJars(String Prefix, ArrayList<String> Jars, String Comment)
void	createInfoTag() DOCUMENT ME!
void	createResourcesTag() DOCUMENT ME!
ArrayList<String>	getLibJars() DOCUMENT ME!
ArrayList<String>	getMainClass(ArrayList<String> JarFiles, String JarDir)
ArrayList<String>	getPluginJars() DOCUMENT ME!
String	getString()
static void	main(String[] args) DOCUMENT ME!
void	writeToFile()

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Field Detail

document

public org.jdom.Document document

rootTag

public org.jdom.Element rootTag

out

public org.jdom.output.XMLOutputter out

fileName

protected String fileName

cytoDir

protected String cytoDir

url

protected String url

saveDir

protected String saveDir

libDir

public String libDir

pluginDir

public String pluginDir

options

protected HashMap<String,String> options

Constructor Detail

JnlpWriterUtil

public JnlpWriterUtil(String[] args)

Creates a new JnlpWriterUtil object.

Parameters:

args - DOCUMENT ME!

Method Detail

main

public static void main(String[] args)
                 throws Exception

DOCUMENT ME!

Parameters:

args - DOCUMENT ME!

Throws:

Exception - DOCUMENT ME!

getString

public String getString()

Returns:

jdom.Document as a string

writeToFile

public void writeToFile()
                 throws IOException

Parameters:

Loc - - directory to write xml file

Throws:

IOException

createInfoTag

public void createInfoTag()

DOCUMENT ME!

createResourcesTag

public void createResourcesTag()

DOCUMENT ME!

addJars

public void addJars(String Prefix,
                    ArrayList<String> Jars,
                    String Comment)

Parameters:

Prefix - (append to beginning of jar file name)

Jars -

Comment -

getLibJars

public ArrayList<String> getLibJars()

DOCUMENT ME!

Returns:

DOCUMENT ME!

getPluginJars

public ArrayList<String> getPluginJars()

DOCUMENT ME!

Returns:

DOCUMENT ME!

getMainClass

public ArrayList<String> getMainClass(ArrayList<String> JarFiles,
                                      String JarDir)

Parameters:

JarFiles -

JarDir -

Returns:

ArrayList of the CytoscapePlugin classes that could be determined from each plugin

addArguments

public void addArguments(ArrayList<String> Args)

Parameters:

Args - These are all plugin arguments at the moment, only specifies the -p tag between each.