Cytoscape 2.8.0 API

cytoscape.visual
Class CalculatorCatalogFactory

java.lang.Object
  extended by cytoscape.visual.CalculatorCatalogFactory

public abstract class CalculatorCatalogFactory
extends Object

This class provides a static method for reading a CalculatorCatalog object from file, using parameters specified in a supplied CytoscapeConfig. What's provided here is the set of files from which to read the calculator information, as well as the construction of a suitable default visual style if one does not already exist.


Field Summary
protected static CyLogger logger
           
 
Constructor Summary
CalculatorCatalogFactory()
           
 
Method Summary
static CalculatorCatalog loadCalculatorCatalog()
           
static CalculatorCatalog loadCalculatorCatalog(String vmName)
          Deprecated. The vmName parameter is no longer used - just use loadCalculatorCatalog(). Will be removed 10/06.
 
Methods inherited from class java.lang.Object
clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait
 

Field Detail

logger

protected static CyLogger logger
Constructor Detail

CalculatorCatalogFactory

public CalculatorCatalogFactory()
Method Detail

loadCalculatorCatalog

public static CalculatorCatalog loadCalculatorCatalog()

loadCalculatorCatalog

public static CalculatorCatalog loadCalculatorCatalog(String vmName)
Deprecated. The vmName parameter is no longer used - just use loadCalculatorCatalog(). Will be removed 10/06.

Loads a CalculatorCatalog object from the various properties files specified by the options in the supplied CytoscapeConfig object. The catalog will be properly initialized with known mapping types and a default visual style (named "default").


Cytoscape 2.8.0 API

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