cytoscape.visual
Class CalculatorCatalogFactory

java.lang.Object
  cytoscape.visual.CalculatorCatalogFactory

public abstract class CalculatorCatalogFactory
extends Object

This class provides a static method for reading a CalculatorCatalog object from file, using parameters specified in a supplied CytoscapeConfig. What's provided here is the set of files from which to read the calculator information, as well as the construction of a suitable default visual style if one does not already exist.

Field Summary

protected static CyLogger

logger

Constructor Summary

CalculatorCatalogFactory()

Method Summary

static CalculatorCatalog	loadCalculatorCatalog()
static CalculatorCatalog	loadCalculatorCatalog(String vmName) Deprecated. The vmName parameter is no longer used - just use loadCalculatorCatalog(). Will be removed 10/06.

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Field Detail

logger

protected static CyLogger logger

Constructor Detail

CalculatorCatalogFactory

public CalculatorCatalogFactory()

Method Detail

loadCalculatorCatalog

public static CalculatorCatalog loadCalculatorCatalog()

loadCalculatorCatalog

public static CalculatorCatalog loadCalculatorCatalog(String vmName)

Deprecated. The vmName parameter is no longer used - just use loadCalculatorCatalog(). Will be removed 10/06.

Loads a CalculatorCatalog object from the various properties files specified by the options in the supplied CytoscapeConfig object. The catalog will be properly initialized with known mapping types and a default visual style (named "default").