Cytoscape 3.0.1 API

Uses of Interface
org.cytoscape.io.CyFileFilter

Packages that use CyFileFilter
org.cytoscape.io Handle import/export of Cytoscape data structures to/from local files/remote URLs. 
org.cytoscape.io.read Handle importing Cytoscape data (network, attributes, session, properties, etc) from files/URLs. 
org.cytoscape.io.write This package provides factory interfaces to be used by anyone wishing to provide export or writing capabilities to the rest of Cytoscape. 
 

Uses of CyFileFilter in org.cytoscape.io
 

Classes in org.cytoscape.io that implement CyFileFilter
 class BasicCyFileFilter
          This is meant to be an basic implementation of CyFileFilter that can either be used directly or extended to provide different acceptance criteria.
 

Methods in org.cytoscape.io that return CyFileFilter
 CyFileFilter CyFileFilterProvider.getFileFilter()
          Return the file filter associated with the IOFactory.
 

Uses of CyFileFilter in org.cytoscape.io.read
 

Methods in org.cytoscape.io.read that return CyFileFilter
 CyFileFilter AbstractInputStreamTaskFactory.getFileFilter()
          Return the file filter associated with the IOFactory.
 

Constructors in org.cytoscape.io.read with parameters of type CyFileFilter
AbstractInputStreamTaskFactory(CyFileFilter fileFilter)
           
 

Uses of CyFileFilter in org.cytoscape.io.write
 

Methods in org.cytoscape.io.write that return types with arguments of type CyFileFilter
 List<CyFileFilter> CyWriterManager.getAvailableWriterFilters()
          Returns a list of the available CyFileFilters that define the available output types.
 List<CyFileFilter> CyPropertyWriterManager.getAvailableWriterFilters()
          Returns the CyFileFilters known to this CyWriter manager.
 

Methods in org.cytoscape.io.write with parameters of type CyFileFilter
 W CyWriterManager.getMatchingFactory(CyFileFilter filter)
          Returns a CyWriterFactory for the appropriate filter.
 CyWriter CyNetworkViewWriterManager.getWriter(CyNetwork network, CyFileFilter filter, File file)
          Returns the CyWriter Task that will attempt to write the specified network to the specified file of the specified file type.
 CyWriter CyNetworkViewWriterManager.getWriter(CyNetwork network, CyFileFilter filter, OutputStream os)
          Returns the CyWriter Task that will attempt to write the specified network to the specified output steam of the specified file type.
 CyWriter CyNetworkViewWriterManager.getWriter(CyNetworkView view, CyFileFilter filter, File file)
          Returns the CyWriter Task that will attempt to write the specified view to the specified file of the specified file type.
 CyWriter CyNetworkViewWriterManager.getWriter(CyNetworkView view, CyFileFilter filter, OutputStream os)
          Returns the CyWriter Task that will attempt to write the specified view to the specified output steam of the specified file type.
 CyWriter CySessionWriterManager.getWriter(CySession session, CyFileFilter filter, File file)
          Returns the CyWriter Task that will attempt to write the specified session to the specified file of the specified file type.
 CyWriter CySessionWriterManager.getWriter(CySession session, CyFileFilter filter, OutputStream os)
          Returns the CyWriter Task that will attempt to write the specified session to the specified output stream of the specified file type.
 CyWriter CyTableWriterManager.getWriter(CyTable table, CyFileFilter filter, File file)
          Returns the CyWriter Task that will attempt to write the specified table to the specified file of the specified file type.
 CyWriter CyTableWriterManager.getWriter(CyTable table, CyFileFilter filter, OutputStream os)
          Returns the CyWriter Task that will attempt to write the specified table to the specified output stream of the specified file type.
 CyWriter CyPropertyWriterManager.getWriter(Object property, CyFileFilter filter, File file)
          Returns the CyWriter Task that will attempt to write the specified property object to the specified file of the specified file type.
 CyWriter CyPropertyWriterManager.getWriter(Object property, CyFileFilter filter, OutputStream os)
          Returns the CyWriter Task that will attempt to write the specified property object to the specified output stream of the specified file type.
 CyWriter VizmapWriterManager.getWriter(Set<VisualStyle> styles, CyFileFilter filter, File file)
          Returns the CyWriter Task that will attempt to write the specified vizmap to the specified file of the specified file type.
 CyWriter VizmapWriterManager.getWriter(Set<VisualStyle> styles, CyFileFilter filter, OutputStream os)
          Returns the CyWriter Task that will attempt to write the specified vizmap to the specified output stream of the specified file type.
 CyWriter PresentationWriterManager.getWriter(View<?> view, RenderingEngine<?> re, CyFileFilter filter, File file)
          Returns the CyWriter Task that will attempt to write the specified view to the specified file of the specified file type.
 CyWriter PresentationWriterManager.getWriter(View<?> view, RenderingEngine<?> re, CyFileFilter filter, OutputStream os)
          Returns the CyWriter Task that will attempt to write the specified view to the specified output stream of the specified file type.
 


Cytoscape 3.0.1 API

Copyright 2011 Cytoscape Consortium. All rights reserved.