| Package | Description |
|---|---|
| org.cytoscape.app |
This is the Cytoscape App API, which supports development of Cytoscape 3.X
apps in a manner similar to apps developed in Cytoscape 2.X.
|
| org.cytoscape.io.read |
Handle importing Cytoscape data (network, attributes, session, properties, etc) from files/URLs.
|
| Modifier and Type | Method and Description |
|---|---|
CyNetworkFactory |
CyAppAdapter.getCyNetworkFactory()
Returns an instance of
CyNetworkFactory. |
| Modifier and Type | Field and Description |
|---|---|
protected CyNetworkFactory |
AbstractCyNetworkReader.cyNetworkFactory
Will be used to create new CySubNetwork if this reader needs to create new CyRootNetwork.
|
| Constructor and Description |
|---|
AbstractCyNetworkReader(InputStream inputStream,
CyApplicationManager cyApplicationManager,
CyNetworkFactory cyNetworkFactory,
CyNetworkManager cyNetworkManager,
CyRootNetworkManager cyRootNetworkManager) |
AbstractCyNetworkReader(InputStream inputStream,
CyNetworkViewFactory cyNetworkViewFactory,
CyNetworkFactory cyNetworkFactory,
CyNetworkManager cyNetworkManager,
CyRootNetworkManager cyRootNetworkManager) |
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