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Cytoscape 2.3.1 (c) 2004 ISB, MSKCC, UCSD | |||||||||
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See:
Description
Interface Summary | |
CyNetwork | CyNetwork is the primary class for algorithm writing. |
CyNetworkData | This will be the interface where things like multi-dimensional data are accessed. |
CyNetworkListener | Interface for listeners that respond to CyNetwork events. |
Class Summary | |
CyEdge | |
CyMain | This is the main startup class for Cytoscape. |
CyNetworkAdapter | Empty implementation of the CyNetworkListener interface, following the adapter pattern useful for defining anonymous inner classes. |
CyNetworkEvent | Events of this class are fired from a CyNetwork object when something happens to the network. |
CyNode | |
CyProject | Deprecated. Will be removed October 2006. |
Cytoscape | This class, Cytoscape is the primary class in the API. |
CytoscapeConfig | Deprecated. Will be removed October 2006. |
CytoscapeInit | Cytoscape Init is responsible for starting Cytoscape in a way that makes sense. |
CytoscapeModifiedNetworkManager | CytoscapeModifiedNetworkManager manages the modified state settings for the networks and listens for PropertyChangeEvents. |
CytoscapeObj | Deprecated. Will be removed October 2006. |
CytoscapeVersion |
Core Cytoscape Classes.
Cytoscape is a software pacakge designed to enable the vizualization and analysis of networks. While commonly used for biological networks, it is designed to be able to accomodate any field which requires a junction between graph theory and associated data.
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www.cytoscape.org | |||||||||
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