cytoscape.data.ontology
Class DBCrossReferences

java.lang.Object
  cytoscape.data.ontology.DBCrossReferences

public class DBCrossReferences
extends Object

Database cress reference.

This class manages the relationships between databases. The cross reference file is available at:
http://www.geneontology.org/doc/GO.xrf_abbs

Since:

Cytoscape 2.4

Version:

0.9

Author:

kono

Constructor Summary

DBCrossReferences()

Method Summary

Set	getDBNames()
DBReference	getDBReference(String abbreviation)
void	load()
void	setDBReference(DBReference db) Add a database reference object

Methods inherited from class java.lang.Object

equals, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

DBCrossReferences

public DBCrossReferences()

Method Detail

load

public void load()
          throws IOException

Throws:

IOException

setDBReference

public void setDBReference(DBReference db)

Add a database reference object

Parameters:

db -

getDBNames

public Set getDBNames()

getDBReference

public DBReference getDBReference(String abbreviation)