Uses of Class
cytoscape.data.annotation.Annotation

Packages that use Annotation

cytoscape.data.annotation.readers	Reader classes for generic annotation data.
cytoscape.data.servers	An interface for annotation data providers and various implementations of that interface, including both remote and in-process implementations.

Uses of Annotation in cytoscape.data.annotation.readers

Methods in cytoscape.data.annotation.readers that return Annotation

Annotation	AnnotationXmlReader.getAnnotation() DOCUMENT ME!
Annotation	AnnotationFlatFileReader.getAnnotation() DOCUMENT ME!

Uses of Annotation in cytoscape.data.servers

Methods in cytoscape.data.servers that return Annotation

Annotation	BioDataServerRmi.getAnnotation(AnnotationDescription description) DOCUMENT ME!
Annotation	BioDataServerInterface.getAnnotation(AnnotationDescription description) DOCUMENT ME!
Annotation	BioDataServer.getAnnotation(AnnotationDescription description) DOCUMENT ME!
Annotation	BioDataServerRmi.getAnnotation(String species, String curator, String type) DOCUMENT ME!
Annotation	BioDataServerInterface.getAnnotation(String species, String curator, String type) DOCUMENT ME!
Annotation	BioDataServer.getAnnotation(String species, String curator, String type) DOCUMENT ME!

Methods in cytoscape.data.servers with parameters of type Annotation

void	BioDataServerRmi.addAnnotation(Annotation newAnnotation) if the new annotation is to an already annotated species, curator and type, then simply add (with possible overwriting for identical
void	BioDataServerInterface.addAnnotation(Annotation annotation) DOCUMENT ME!
void	BioDataServer.addAnnotation(Annotation annotation) DOCUMENT ME!
protected Ontology	BioDataServer.pickOntology(Ontology[] ontologies, Annotation annotation)