Uses of Class
cytoscape.util.CytoscapeAction

Packages that use CytoscapeAction

cytoscape.actions	UI classes that are attached to menu items in the menu or tool bar of the window.
cytoscape.dialogs	UI classes for performing some action, generally more complicated than those contained in the cytoscape.actions package.
cytoscape.layout.ui
cytoscape.util.undo
cytoscape.view	Classes that provide a window to display a graph and UI components connected to that window, such as the menus.

Uses of CytoscapeAction in cytoscape.actions

Subclasses of CytoscapeAction in cytoscape.actions

class	AlphabeticalSelectionAction
class	ApplyLayoutAction
class	ApplyVisualStyleAction Apply Visual Style for a set of selected networks.
class	BackgroundColorAction Deprecated. Use vizmapper gui to edit background color. Will be removed 5/2008
class	BendSelectedEdgesAction
class	BirdsEyeViewAction Deprecated. This class is no longer used since the BirdsEyeView is now always part of the NetworkPanel. BirdsEyeView creation and event handling is done by the BirdsEyeViewHandler and initialized in CytoscapeDesktop This class will be removed 5/2008.
class	BookmarkAction
class	CloneGraphInNewWindowAction
class	CreateNetworkViewAction
class	CytoPanelAction
class	DeleteAction action for deleting selected Cytoscape nodes and edges
class	DeselectAllAction
class	DeSelectAllEdgesAction
class	DeSelectAllNodesAction
class	DestroyNetworkAction
class	DestroyNetworkViewAction
class	ExitAction
class	ExportAction
class	ExportAsGMLAction
class	ExportAsGraphicsAction Action for exporting a network view to bitmap or vector graphics.
class	ExportAsInteractionsAction write out the current graph to the specified file, using the standard interactions format: nodeA edgeType nodeB.
class	ExportAsXGMMLAction This action is for exporting network and attributes in XGMML file.
class	ExportEdgeAttributesAction
class	ExportNetworksAsNNFAction This action is for exporting network and attributes in XGMML file.
class	ExportNodeAttributesAction
class	ExportVizmapAction Export visual styles as a vizmap.props file
class	FitContentAction
class	GraphObjectSelectionAction
class	HelpAboutAction
class	HelpContactHelpDeskAction
class	HelpContentsAction Really just a wrapper for the CSH.DisplayHelpFromSource action.
class	HideSelectedAction
class	HideSelectedEdgesAction
class	HideSelectedNodesAction
class	ImportEdgeAttributesAction
class	ImportExpressionMatrixAction User has requested loading of an Expression Matrix File.
class	ImportGraphFileAction Imports a graph of arbitrary type.
class	ImportNodeAttributesAction
class	ImportVizmapAction
class	InvertSelectedEdgesAction
class	InvertSelectedNodesAction
class	ListFromFileSelectionAction Select nodes from a text list of node IDs.
class	LoggerAction Created by IntelliJ IDEA.
class	MemoryUsageAction
class	NewNetworkAction creates a new network and associates an editor with it
class	NewSessionAction
class	NewWindowSelectedNodesEdgesAction
class	NewWindowSelectedNodesOnlyAction
class	OpenSessionAction Call the session reader and read everything in the zip archive.
class	PluginManagerAction
class	PluginUpdateAction
class	PreferenceAction
class	PrintAction
class	ProxyServerAction
class	SaveSessionAction Save Session action. Write current states into a CYS file.
class	SaveSessionAsAction Same as SaveSessionAction, but always opens file chooser.
class	SelectAdjacentEdgesAction
class	SelectAllAction
class	SelectAllEdgesAction
class	SelectAllNodesAction
class	SelectConnectedNodesAction select every node connected to the current selected edges.
class	SelectFirstNeighborsAction select every first neighbor (directly connected nodes) of the currently selected nodes.
class	SetVisualPropertiesAction
class	ShowAllAction
class	ShowCustomGraphicsManagerAction Display Custom Graphics Manager GUI.
class	ShowGraphicsDetailsAction
class	StraightenSelectedEdgesAction
class	ToggleVisualMapperAction This class implements two menu items that allow enabling and disabling the visual mapper.
class	UnHideSelectedEdgesAction
class	UnHideSelectedNodesAction
class	WebServiceNetworkImportAction
class	ZoomAction
class	ZoomSelectedAction

Uses of CytoscapeAction in cytoscape.dialogs

Subclasses of CytoscapeAction in cytoscape.dialogs

class

ShrinkExpandGraph This class shifts the nodes to shrink or expand the graph: it averages the coordinates of all the nodes to find the center it translates the graph to a center at (0,0) it multiplies each node coordinate by a factor m it translates the graph back to the original center

Uses of CytoscapeAction in cytoscape.layout.ui

Subclasses of CytoscapeAction in cytoscape.layout.ui

class

SettingsAction

Uses of CytoscapeAction in cytoscape.util.undo

Subclasses of CytoscapeAction in cytoscape.util.undo

class	RedoAction An action that calls redo for the most recent edit in the undoable edit stack.
class	UndoAction An action that calls undo for the most recent edit in the undoable edit stack.

Uses of CytoscapeAction in cytoscape.view

Methods in cytoscape.view with parameters of type CytoscapeAction

void	CyMenus.addAction(CytoscapeAction action) Add the menu item.
void	CyMenus.addAction(CytoscapeAction action, int index) Add the menu item in a specific position
void	CyMenus.addCytoscapeAction(CytoscapeAction action) Takes a CytoscapeAction and will add it to the MenuBar or the Toolbar as is appropriate.
void	CyMenus.addCytoscapeAction(CytoscapeAction action, int index) Add the menu item in a specific position