UC San Diego Receives $6.5M to Decipher Protein Interactions, Steve Sinovic, San Diego Business Journal, December 13 (2010)

Scientists Map Genetic Network’s Response to DNA-Damaging Agents, Steve Sinovic, San Diego Business Journal, December 3 (2010)

UCSD Gets $6.5M NIH Grant to Fund New Network Biology Center, GenomeWeb Daily News, November 2 (2010)

UCSD awarded $15.4 million for systems biology research, La Jolla Light, October (2010)

Stanford, UCSD Biologists Take Plunge Into Arpanet-Style Project with Sage Bionetworks, Luke Timmerman, Xconomy -- Seattle, October 6 (2010)

Neither models nor miracles: a look at synthetic biology, Robert Fortner, Ars Technica, August 24 (2010)

Life Science Technologies: Protein-Protein Interaction Technologies Toward a Human Interactome, Jeffrey M. Perkel,Science, July 23 (2010)

More harm than good?, Justine Davies, The Guardian, June 23 (2009)

Search for pathway-level biomarkers, Amy Swinderman, Drug Discovery News, August (2009) [Print version]

More harm than good?, Justine Davies, The Guardian, June 23 (2009)

Amid Efforts to Give Foods More Antioxidant Punch, Mysteries Remain, Jennifer LaRue Huget, The Washington Post, June 2 (2009)

Oxidative stress may extend lifespan, The Times of India, May 29 (2009)

UCSD's Ideker Seeks Contributors for 'Clearinghouse' of Network Models, Vivien Marx, October 17 (2008)

Primetime for Protein Arrays, Jeanene Swanson, Genome Technology, July/August (2008)

Networking, protein style, Nicola McCarthy, Nature Reviews: Cancer, December (2007)

Using Molecular Pathways to Assess Cancer Patients, Katherine Bourzac, Technology Review, October 17 (2007)

What Can Systems Biology Do for You? Four computational modeling strategies and the data that build them, Jeffrey M. Perkel, The Scientist, March (2007)

Friendster for Proteins, Robert Langreth and Matthew Herper, Forbes, March 12 (2007)

Scientist to Watch. Trey Ideker: Navigating Deep Waters, Ishani Ganguli, The Scientist, Oct (2006)

MS and Other Analytical Methods Aid the Detection and Understanding of the Persistent Parasite Plasmodium, Tom Hayden, Analytical Chemistry, August 1 (2006)

Cell, Heal Thyself: New systems biology model reveals how cells repair DNA damage, Jacobs School of Engineering, May 18 (2006)

By creating maps of the body’s complex molecular inter­actions, Trey Ideker is providing new ways to find drug, Jon Cohen, Technology Review, Mar 20 (2006)

10 Emerging Technologies Report: Comparative Interactomics, Technology Review, Feb 21 (2006)

Two UCSD Bioengineering Professors Recognized as Pioneers in Emerging Field of Comparative Interactomics, Jacobs School of Engineering, Nov 2 (2005)

Malaria Parasites 'Wiring' May be Key, The San Diego Union Tribune, Nov 3 (2005)

Researchers Develop New Method To Find Deadly Malaria Parasite's Achilles Heel, ScienceDaily, Nov 2 (2005)

TR35: Technology Review's top 35 innovators under the age of 35, Technology Review, Oct (2005)

UCSD Bioengineering Professor Trey Ideker Named Top 35 Young Scientist By MIT'S Technology Review Magazine, UCSD News, Sept 6 (2005)

Mapping 'circuitry' of yeast genes using technique that could be applied to humans, Medical News Today, May 7(2005)

Researchers Map 'Circuitry' of Yeast Genes Using Technique That Could be Applied to Humans, Science Daily, May 6 (2005)

Examination of Internal 'Wiring' of Yeast, Worm, and Fly Reveals Conserved Circuits , Jacobs School of Engineering, Feb 8 (2005)

UCSD Bioengineering Professor Wins 2004 Packard Foundation Fellowship, Jacobs School of Engineering, Oct 15 (2004)

UCSD and SDSC to Host RECOMB Computational Molecular Biology Meetings, Jacobs School of Engineering, Mar 23 (2004)

PATHBLAST: Software Tackles Protein Pathways, Jacobs School of Engineering, Sept 25 (2003)

Hot Papers: Yeast Pushes the Proteomic Envelope, Mignon Fogarty, The Scientist, July 28 (2003)

Integrating the Pieces of Systems Biology, Beth Schachter, Genomics and Proteomics, June (2003)

"The Path Not Taken", Edward M. Marcotte, Nature Biotech, July (2001), pp.626-627

ISB Scientists Have Their Work Cut Out, John S. MacNeil, Genome Web, May (2001)